UFO08481.5prime Sequence
1131 bp (1020 high quality bases) assembled on 2011-07-29
> UFO08481.5prime
CAGTCGACATGGCTTCCATGGAGCTGACCCTGAAATCGGACTATTCCGCC
GATTCTGTTATCGATGACATTATATCCAAGTCGCTGGCATCCCAGGCAGT
TCCAAGGACACACAAGAGATCAACTCGCGTCTCCTTTCGATCCCTGGCCA
AAGTTATAATGACTCTGATCGGAAACCTCAAGAAGGCATCATCATTTCAT
GAGGTGAAGGACATAGACTACTGGCGTAATCTGGCCGAGTCCCGTTTGGA
GGTCAACAATCGCTATGGGAGGTTTATCGAAGCCCAGCAAAGGCGAATCT
ATACCCTGGAGACCAGGCTCCACAACCTGGTCAATTTGGCCCGCGAGACC
CAGAAAATGCTGGCCGAGATTGGGGCCGAGAAGCGGGCCTGCGAGGAACT
TGGCCATGGCGAGCACGCCGACGCAAGCTTTCTAGACCATTCGTTTGGCG
CGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAAT
CACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACC
AATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGA
GTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGAT
ATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCAT
TAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGA
ATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCAT
GGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAA
AACTGGTGAAACTCAACCCAGGGATTGGCTGAGACGAAAACATATTCTCA
ATAAACCCTTTAGGAAATAGGCCAGGTTTTCACCGTAACACCGCCACATC
TTGCGAATATATGTGTAGAACTGCCGGAAATCGTCGTGTATCCCCTCCAG
AGCGATGAAACGTTCAGTTGCTCATGAAACGGTGTACAGGGTGAACACTA
TCCATATCACAGCCTCACCGTCTTTCATTGCCATACGGATCGATGAACAT
TCATCAGCGGGCAGATGTATAGCCGATAACT
UFO08481.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:25:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8840-RA | 640 | CG8840-RA | 131..544 | 9..422 | 2070 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:25:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3410690..3411103 | 9..422 | 2070 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:25:17 has no hits.
UFO08481.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:11:45 Download gff for
UFO08481.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8840-RA | 81..501 | 9..431 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:31:16 Download gff for
UFO08481.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8840-RA | 131..551 | 9..431 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:59:44 Download gff for
UFO08481.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8840-RA | 131..551 | 9..431 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:59:44 Download gff for
UFO08481.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3410690..3411106 | 9..427 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:31:16 Download gff for
UFO08481.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3410690..3411106 | 9..427 | 99 | -> | Plus |
