UFO08486.5prime Sequence
1125 bp (1016 high quality bases) assembled on 2011-07-29
> UFO08486.5prime
CAGTCGACATGATGAGTGAAGAAGTAATTGCTAAGAACATTTCCTTGTCA
AGTCTTACCTACCCAAAGCGTATACCAAAGATTAAGTTCGGTCCTATCAA
GGACGAAATGGGTTTCACGCTCAGCGAAAGATTGGCCCTCAGACAGGCGT
GGAACTTGGTCAGACCCTTTGAGCGGCGCTACGGTCAGGACGTATTCTAT
AGCTTCCTAAATGATTACTATTGGGGTATTAAGAAGTTCCGGAACGGAGC
TGAGCTCAACGTGAAAGCCCTGCACTCGCATGCCCTGCGATTTATTAACT
TTTTTGGACTTCTAATCGAGGAGAAGGATCCAGTAGTGTTCCAGCTGATG
ATAAACGACAACAACCATACCCACAATCGCTGCCATGTGGGCTCCGTTAA
TATTGGGCATCTGGCCCAGGCCCTGGTGGACTATGTGCTAAAGGTGTTCC
ATAAGGTCAGCTCTCCATCGCTGGAACAGGGTTTGAGCAAACTCGTGGAG
AAGTTTCAGAACTACCAGGACCAGCAGTCGAATACCTCCGGATACAATCG
CCTGAGCAAGGTTAACTTTGATTCACGACCGCCCAGAGGTAACCCAGCAA
GCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAAT
CATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTC
ATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGA
GCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATC
AACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACT
CATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCA
TCACAAACGGCATGATGAACCTGAATCGCCAGCCGCATCAGCACCTTGTC
CGCCTTGCGTATATATTTGCCCATGTGAAACGGGGCGAGAGTGTCCATAT
GCACGTTAATCAACTGGTGAACTCACCCAGGATGCTGAAACGAAAAACAT
ATCCCATATCCTTTAGGAAATAGGCAGGTTCACGGTACACGCCAATCTGG
CTAAATTATTGTTAACTGCGATGCG
UFO08486.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:25:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| glob3-RA | 1118 | CG14675-RA | 93..680 | 9..596 | 2940 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:25:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5830393..5830599 | 201..407 | 1035 | 100 | Plus |
| 3R | 32079331 | 3R | 5830154..5830347 | 9..202 | 970 | 100 | Plus |
| 3R | 32079331 | 3R | 5831158..5831347 | 407..596 | 950 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:25:27 has no hits.
UFO08486.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:11:47 Download gff for
UFO08486.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glob3-RA | 93..680 | 9..596 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:31:22 Download gff for
UFO08486.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glob3-RA | 93..680 | 9..596 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:59:50 Download gff for
UFO08486.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glob3-RA | 93..680 | 9..596 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:59:50 Download gff for
UFO08486.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5830395..5830599 | 203..407 | 100 | -> | Plus |
| 3R | 5831159..5831347 | 408..596 | 100 | == | Plus |
| 3R | 5830154..5830347 | 9..202 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:31:22 Download gff for
UFO08486.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1656117..1656321 | 203..407 | 100 | -> | Plus |
| arm_3R | 1656881..1657069 | 408..596 | 100 | == | Plus |
| arm_3R | 1655876..1656069 | 9..202 | 100 | -> | Plus |
