UFO08492.5prime Sequence
1128 bp (1008 high quality bases) assembled on 2011-07-29
> UFO08492.5prime
CAGTCGACATGAGTTCAAAGTTGCATATGTGCCGCTGGATGCTGCTGGTC
ATCGGAGTCTGTTGCCTGATGGGCAGCTCGTCGGGCAGCTTCTGCTCCCT
GGAGCGGATGAAGAAGTTCGCGATGGAGGCGTGCGAGCACCTCTTTCAGG
CGGACGAGGGTGCCCGCCGCGACAGAAGGTCCATCGAGTTCGCGCACCAC
CATCTGAATCGACTTGGATCCGGCAAAACGCACAACAAGCATCACTACAT
CAGCCGAAGCAGCTATCCAATGGGTGGCTACCTGAAGGTGACCCGGGAGC
ACTTCAATCGCCTCAGCGAACTGGACATCTTTCCGCGCTACAAGCCCATC
AAGCCGCACCACGAAAAGAAGCATCGCTTCAAGAGGGATCACTCGAGCAG
GTCCTACAACAACATTCCCTACTGCTGTCTAAACCAGTGCGAGGAGGAGT
TCTTCTGCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTA
AGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAG
GAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCC
GGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATT
ACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCC
CGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCG
ACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCAT
CAGCACCTTGTCGCCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGG
GCGAAGAAGTTGTCCATATTGGCCACGTTTAATCAAAACTGGTGAAACTC
ACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAACCCTTTAGGG
AAATAGCCAGGTTTTCACGTAACACGCCAACATCTTGCGAATATATGTGT
AGAACTGCCGAAATCGTGTGCTATCACTCAGAGCGATGAAAACGTTTCAG
GTGCTCATGAACGGTGTTAACAAGGGTGACCTATCATTCACAGCTCACGT
CTTTCATGGCATCGAATTCCGGAGATTG
UFO08492.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:25:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ilp8-RB | 867 | CG14059-RB | 184..633 | 9..458 | 2250 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:25:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17030046..17030284 | 458..220 | 1195 | 100 | Minus |
| 3L | 28110227 | 3L | 17030709..17030909 | 219..19 | 1005 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:25:37 has no hits.
UFO08492.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:11:49 Download gff for
UFO08492.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14059-RB | 177..637 | 1..463 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:31:28 Download gff for
UFO08492.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp8-RB | 177..637 | 1..463 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:59:55 Download gff for
UFO08492.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp8-RB | 177..637 | 1..463 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:59:55 Download gff for
UFO08492.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17030709..17030909 | 19..219 | 100 | -> | Minus |
| 3L | 17030046..17030284 | 220..458 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:31:28 Download gff for
UFO08492.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17023146..17023384 | 220..458 | 100 | <- | Minus |
| arm_3L | 17023809..17024009 | 19..219 | 100 | -> | Minus |
