UFO08522.5prime Sequence
1118 bp (1027 high quality bases) assembled on 2011-07-29
> UFO08522.5prime
CAGTCGACATGCGCTTGCCGCTAATCTTTCATAGCCTGCACCAGCGTCTT
CAAAAAATGTTTGTAAAGAGAACTGAGGGCGGCGAAAGTGCCACGCCCAG
CATTCAGGACATCGCCGGTCGACTGGCGGAGGAGCAGCAGCGGCTTCGCC
AATTGGAGGCCACAACGACTCCCAAAGAGCGGACAATTCTTGTCTTGGGA
AGCAAGTGTGTGGGTAAGACGACGGCCATTAATAAGTTCTTTGATCGCGA
GGAACACGCAACGCGGCCAACTCTAGCACTGGAGTACAGCTTTGGACGAC
GGATTGGCAGTGGAAAGTCACCGCAGGTGATGAACGTTTGGGAACTGGGC
TCCCTGGACAATGCCGAGCAATTGCTGGAAGTACCAATGCGGACACATGG
TTTGCAGCAACTAGCCGTCATCCTTATGCTAGATCTCTCCCAGCCACAGC
GATTTTGGACGGATTTGGAGTGCGCATACAAGGGACTGAGGGATACGGCG
CAGCAGATGATGGAGAAGGTAACACCGGAGCTTAGGGAAATCCTCGAACA
GCGAACAGTGGAGCGAGTGGGTCAGCAGAACAAAGATTCGGAAAAACTAG
ACCCTCTGCCCTTTCCAGTGATAATTGTCGGTGGGAAGTACGATGTGTTT
TCTGGTTTCGATCCTATTATCAGGAAGCACACCTGCCGCTGCTTGCGATC
GATGGCCCACCTCATAGGTGGCGCATTGCTGTTCTATTCCCAGAAGATGC
CCAAGTTGGCCAAAGTCCTGAGGGACACCATTTGTCACTTGGGATTTGGC
AGTCCTGCTCATCCGTTCCGCTCTCATGTCGTGCACTTCAATGAACCACT
GTGCATTTGGTTTGGAACGGACAGTTGGTCGAAAATTGGTGATACTGGCG
CCAAAGTGTGAGCGAATTGAGCCACATTCGGAATGGAGTACCGCAGCTGC
AGCTAGAAGAAGCAGAGCTAAAAGAACCACCGATCCGGCAGACCCTGGTT
TCAGGAGTTAGTCATCGATGAAATCGATCGCAGAAGACGAGGACTCGCAG
ATTATGAAGAATGTCTGCTGCCGGAGTCGAGTGTCACTGCAGCCTTCCGA
ACATCTGGCGACGCTCCA
UFO08522.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:27:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3769-RA | 1333 | CG3769-RA | 112..1189 | 9..1071 | 4905 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:26:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9435824..9436659 | 212..1037 | 3595 | 98.1 | Plus |
| 2L | 23513712 | 2L | 9435510..9435714 | 9..213 | 1025 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:27:00 has no hits.
UFO08522.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:12:08 Download gff for
UFO08522.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3769-RA | 1..1063 | 9..1057 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:32:26 Download gff for
UFO08522.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3769-RA | 107..1174 | 1..1057 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 18:00:45 Download gff for
UFO08522.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3769-RA | 107..1174 | 1..1057 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 18:00:45 Download gff for
UFO08522.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9435505..9435713 | 1..212 | 98 | -> | Plus |
| 2L | 9435825..9436683 | 213..1057 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:32:26 Download gff for
UFO08522.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9435505..9435713 | 1..212 | 98 | -> | Plus |
| arm_2L | 9435825..9436683 | 213..1057 | 97 | | Plus |
