UFO08526.5prime Sequence
1145 bp (1014 high quality bases) assembled on 2011-07-29
> UFO08526.5prime
CAGTCGACATGGTTGTTCCGAGGATTAAGAAAAGAAGTCACAGTAGGAAA
ATCGAGGCGACGCCAATGGATGTGGAGGAAAAAGATAATAATCGTGATCG
TAAACACATTTTGAATCATCTATCGCGGGCACCCGGAAAATGTATTTTGA
GTAACTGCAATCAATTGGTTTTCCCATCGAATATGCTGGTACACATGCTC
CGCAAGCACAACAATAGTCCGAATACCAACTTGGCGATCATCTATGACAA
TCAACGATTGCGTAAAACCTTCAATCTAAATAGTTTGAAATACGACGAAC
CGCAGGTGTTGAATATACTCCTGTATGCTGGCACCGAGGGTAAGCCGCAC
ACTCGACCAGCTCGCCGGTACTTGAGTTATCCCAATTGCGGTCTACCTCA
TAGTTTCGGTCGGTACGAGCATCATTTAATGATGAATCTAATGATTTGCA
AGACCTCTTGGTTCTCCATGCTGCCGGACAGAATATGCGGCGAGAAGCTG
GAGAAAATGCATGGTACGCCGGAGAACACCATATATGTTATATGGCTGAT
GGGCCCGGAGACCTCAAGTCGTATGTTTTATACGCTGACTGCATACGATC
GTTACTATATACAATCGCGCAGTGTTATTCGGAAAACAAGGAACTTTTTT
CTATCGCAGCAACCGAAGGACTTTCTCAATCACGAGAATGATTACCTGAT
GCTTCGCCATGAGGAGGCAATGGATTTGATGAACGGCGAGGGTGACGAAT
TGAATCAGACATCGTACATTAAGTTGGAACTATTTTTGCACGAGGAACCT
AAACTGGTTTCGTTTCCCACACATTTGTTTCCGACTCCAATGATGTCAGA
TACAAATAAGAATATTCCCACTAATCATTTAGGCGATTAATGTTCTGCCC
CCTAAAATGATGACGAAACAAACTGGAAACGGGCCATTATGATGTCCAGA
AAAGGACCTGTGGCAGCGACTAAAACGGCGAAAGAATCAAATGACACCCT
CAGAACGATCAAGAATAACTCTTTGATAGTAAAGGTAAAAATTGAACTCC
TAAATTCTACACTCAAGTGGAGGATTCCTAAGCAAGAAGAAACGCCAAAA
AAAAAGTCCTAAACGAAGATCAGCCAGCTCCTCAAAATGGAATCC
UFO08526.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:27:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12681-RA | 1594 | CG12681-RA | 123..1231 | 9..1122 | 5030 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:27:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4875792..4876831 | 9..1051 | 4775 | 98.3 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:27:47 has no hits.
UFO08526.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:12:19 Download gff for
UFO08526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12681-RA | 123..1211 | 9..1101 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:33:02 Download gff for
UFO08526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12681-RA | 123..1211 | 9..1101 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 18:01:10 Download gff for
UFO08526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12681-RA | 123..1211 | 9..1101 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 18:01:10 Download gff for
UFO08526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4875792..4876880 | 9..1101 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:33:02 Download gff for
UFO08526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4769825..4770913 | 9..1101 | 97 | | Plus |
