UFO08543.5prime Sequence
1112 bp (969 high quality bases) assembled on 2011-07-29
> UFO08543.5prime
CAGTCGACATGAAGTTGTCCCTTGTTCTCTTCGTCCTCTCGATGGTTTTG
TATGTGGCCCATGTCAGAGCTGCTGACAGCAGCACAAGCACGGAATCGAG
TACCAGCACCACGGATAGCACCACCACGGAATCCACCACAGAGTCTACCA
CATCGTCGTCCTCTTCATCTAGTTCGGGCTCAAACAAGAAAATCGTGCGT
CTCAGCAATCTGAAGTACTCGATCACCAGGAAAATCAGAGTTGGATCCAC
CACCAGTTCCTCGACCAGATCCAAAAGTTCCCGCGCCAAGTCCCGCAAGG
CCCGTCTAAATGCGGCTAAACGATCCAAGAAGGCCGCCAACCGAAAACTC
AACAAGAAGTCCAAGAACCGCAATGTACGCGTGGTCCGCGGTGCAAGCTT
TCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATA
ATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGA
CTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGT
TCTGAACAAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAAC
AGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCAT
CGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCA
CAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCC
TTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGATGTTGTCCA
TATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCT
GAGACGAAAAACATATTCTCATAAACCCTTTAGGGAAATAGGCCAAGGTT
TTCCCGGTAACACGCCACATCTTGCGAATATATGTGTAAAACTGCCGGAA
ATCGTCTGGTATTCCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCAT
GGAAAACGGTGTACATGGTGACCCTATTCCAATCACAACTCACGTTCTTC
ATGCCATATCCAATTCCGGATGACATTCTCAAGGCGCAGAAAGTGTAATA
GCGATAAACTTG
UFO08543.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:28:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34273-RA | 446 | CG34273-RA | 10..395 | 7..392 | 1930 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:28:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14517051..14517436 | 7..392 | 1930 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:28:06 has no hits.
UFO08543.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:12:24 Download gff for
UFO08543.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34273-RA | 4..401 | 1..400 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:33:15 Download gff for
UFO08543.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34273-RA | 4..401 | 1..400 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 18:01:22 Download gff for
UFO08543.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34273-RA | 4..401 | 1..400 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 18:01:22 Download gff for
UFO08543.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14517045..14517436 | 1..392 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:33:15 Download gff for
UFO08543.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10342767..10343158 | 1..392 | 99 | == | Plus |
