UFO08550.5prime Sequence
1115 bp (1003 high quality bases) assembled on 2011-07-29
> UFO08550.5prime
CAGTCGACATGGACCCAGAGTCGCAGTGTCCGCAGTATGGCGAGGTGAAC
CAGCTGGGCGGCGTCTTTGTCAACGGCCGTCCGCTGCCCAATGCGACCAG
GATGCGGATCGTGGAGCTGGCCCGCCTGGGCATCCGACCCTGCGACATAT
CGCGCCAGCTGCGAGTGAGTCACGGCTGCGTGTCCAAGATCCTGGCCAGG
TACCACGAAACGGGCTCCATACTACCCGGCGCAATTGGGGGATCCAAGCC
GCGCGTGACCACACCCAAGGTGGTCAACTACATCAGGGAACTGAAGCAGC
GAGATCCCGGCATCTTTGCGTGGGAAATCCGGGACCGTTTGCTCAGCGAG
GGCATATGCGACAAAACGAATGTACCCAGTGTGAGCTCCATATCGAGAAT
CCTGCGCAACAAGTTGGGCAGCCTGGGGCATCAGCACACGCCGGGAACGG
TGATGGGCAGCGGAAGCAGCAGCGGTGGCGGCAGTGTGTCCAGCAATGGT
GGACAAAACAATGGCACGAGTGCCAGCAATAATATTAATCTGAGCAATCT
GGGTAATCCCGGCGGTGGACCGCACCATCCGCACCACCATCATCATCATC
AGTCAGCGGCGGCGGCGGCAAGTGCCCATCATGTGCACGCCCACGCCCAT
GCCCACGCCCACCTGTACAACTCCATCTACCAGCCGTACAGTGCTGCGGC
GGCCTACAGCATGAAGACGCCCTGTGGAAGTCCATCCCCGCCGCAGGAGC
GGGCGGTCAGGGATCAGTGCCCCATCCCCACCAGCTGAGGAGTGTGGCCG
CCGCAGCCGCTGCCGCCCACTGGCCCTCCTCCCACTCGGTCAGCGATATC
CTGGCCCACCATCAGGCTGTTGCCCTGCGCGCCAGTTGCCAAGTGGCGTC
AGAGTGGGTGGAATGGGCGGCATGGGCAGTACGTATCCCCGCTGCCGATG
ACTCTTCGCCGGTGCGGGACGGTCGGTGGTCAGCCACTGCTCGACTGCAG
GGTGGCCGGGACAGCAGTCCCGTACAACCTACTAACATGTAACTTCAGAA
CGGCGATGCATCCCCACCATATCACCGCCGATGATGCGCTGGAACAAGCC
TAGCAAGCTTCATGA
UFO08550.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:28:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Poxm-RC | 2566 | CG9610-RC | 665..1766 | 5..1093 | 4965 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:28:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8319927..8320915 | 998..16 | 4620 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:28:19 has no hits.
UFO08550.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:12:27 Download gff for
UFO08550.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Poxm-RC | 661..1751 | 1..1081 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:33:25 Download gff for
UFO08550.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Poxm-RC | 661..1751 | 1..1081 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 18:01:30 Download gff for
UFO08550.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Poxm-RC | 661..1751 | 1..1081 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 18:01:30 Download gff for
UFO08550.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8319840..8320915 | 16..1081 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:33:25 Download gff for
UFO08550.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4145562..4146637 | 16..1081 | 97 | | Minus |
