UFO08559.5prime Sequence
1123 bp (986 high quality bases) assembled on 2011-07-29
> UFO08559.5prime
CAGTCGACATGAAGTGGCTTAGTTTGTTCCTGGTATTCGGCATCCTCGGA
CTCATCGGCAGTCTGGGCACTTTAGCCCTAGCGGAACCCAATCCGGAGCC
CAAGGGTCGTCCGCACACAACGCGACGTCCTCGAAACGATAACGACAACG
ATCGACGCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTA
AGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAG
GAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCC
GGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATT
ACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCC
CGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCG
ACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCAT
CAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGG
CGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTC
ACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGG
GAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGT
GTAGAAACTGCCGGAAATCGTCGTGGTATTCACTCCAGAGCGATGAAAAC
GTTTCAGTTTGCTCATGGAAAACGGTGTAACAAGGGTGAACACTATCCCA
TATCACCAGCTCACCGTCTTTCATTGCCATACGAAATTCCCGGATGAGCA
TTCATCACGCGGGCAGAATGTGAATAAACGCCGGATAAAACTTGTGCTTA
TTTTTCTTTACGTCTTTAAAACGCCGTAATATCCAGCTGAACGGTCTGGT
TTTAGTACATTGAGCAACTGACTGAATGCCTCAAAATTTTTCTTTACGAT
GCCATTGGGATATATTTCAACGGTGTAATTTCCAGTGATTTTTTTTCTTC
AATTTTAGCTTTCTTAGCTCCTGAAAGAATCATAACTTCGGTATAGCCTA
CTTACGAAGGTTAAGATCCAATT
UFO08559.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:28:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34208-RA | 380 | CG34208-RA | 23..176 | 5..158 | 755 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:28:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22333148..22333301 | 5..158 | 755 | 99.4 | Plus |
Blast to na_te.dros performed 2014-11-26 17:28:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 232..299 | 727..794 | 123 | 68.1 | Plus |
UFO08559.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:12:32 Download gff for
UFO08559.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34208-RA | 21..182 | 1..162 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:33:38 Download gff for
UFO08559.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34208-RA | 21..182 | 1..162 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 18:01:43 Download gff for
UFO08559.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34208-RA | 21..182 | 1..162 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-26 18:01:43 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 01:33:38 has no hits.
