UFO08569.5prime Sequence
1095 bp (979 high quality bases) assembled on 2011-07-29
> UFO08569.5prime
CAGTCGACATGTCCAAGTTACCAAAAGCATCACTTAGTTTGAAGCAGTTT
ATGCTGCGCCAGGAAGTACTGAAGCTCTACCGGGAAATATTTCGAACGAT
TCGTCAGGTTCCCGACAAAAACAGCCAGCTGGAGCTAAAATCCTGGGCAC
GGCATGACTTCCAGACGAATCGCCATCAAAGTGACGAGGTGGCCATCAAG
ATGCTCCTTCAGCACGGCAGACGCAGCCTCACAGAACTAAGGACCAGCCT
CCAACTGAGCGGGGTGAGCGAGGGCAAAGCAAGCTTTCTAGACCATTCGT
TTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAAT
CATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATT
CTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCA
GATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAG
CTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTA
ATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGA
ACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTT
GCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTA
AATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATA
TTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGC
CACATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGTATTC
ACTCCAGAGCGATGAAACGTTTCAGTTTGCTCATGAAAACGTGTAACAAG
GTGACACTATCCCATATCACAGCTCACGTCTTTCATGCATACGAAATTCG
GATGAGCATCATCAGCGGCAGATGTGATAACGCGATAACTGTGCTATTTT
CTTACGTCTTTAAAAGGCGTAATTTCACTGACGTCTGTTATAGTACGTGA
CACTGACTGATGCTCAAATGTCCTACGATGCCATGAATACACGGT
UFO08569.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:28:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34229-RA | 474 | CG34229-RA | 117..386 | 9..278 | 1350 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:28:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11841844..11842076 | 46..278 | 1165 | 100 | Plus |
| 2R | 25286936 | 2R | 11841724..11841762 | 9..47 | 195 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:28:50 has no hits.
UFO08569.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:12:34 Download gff for
UFO08569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34229-RA | 109..386 | 1..278 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:33:43 Download gff for
UFO08569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34229-RA | 109..386 | 1..278 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 18:01:48 Download gff for
UFO08569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34229-RA | 109..386 | 1..278 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 18:01:48 Download gff for
UFO08569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11841716..11841762 | 1..47 | 91 | -> | Plus |
| 2R | 11841846..11842076 | 48..278 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:33:43 Download gff for
UFO08569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7729221..7729267 | 1..47 | 91 | -> | Plus |
| arm_2R | 7729351..7729581 | 48..278 | 100 | == | Plus |
