UFO08576.5prime Sequence
1134 bp (1028 high quality bases) assembled on 2011-07-29
> UFO08576.5prime
CAGTCGACATGAGCTTCTCGGAAAACACCTCCGATTCTGAATGGAAGACA
GACAAAATGCTAAAGGCGCGGACTGCTAAGAAATCTTTAAAGCTGGACAA
GGAGCACAGAACTCTGAAACCTAAATATAACCAGAAGTTCTGCGAAAAGT
GGCTCAAGATTTTCGATCCATGGCTCCGACGGGCGGCCGAGGATCCTAAC
AAGCCATTCTGCCGCGCTTGCCAGTGCACCATGGACTGCAATCGATGCCA
CCTGGTGCGGCACGAGCGAACCACCAAGCACAAGCGCAATCTGGAGGCTC
TGCTCACAAAGGGCGAAGGCGCGGCGGTCCAGGAGTTCCGGATTCGCCAG
CAGCGTAGCAAGTACTATCACCAGCGTAAATTGGTAGTGATGGAGCCCTT
GGCTGAGAACCACGAGTTGGAGCCGCCTTCCACTCCAGAGCCTATGCCCG
TGATGGCCATTGCTGATCAAAGCCTCTGTTCTGCAGCCAGTGAGAAGGTG
ACAGTACCCAAACAGGAGTTCTTATCAGAGACAGAGGTCACAACAAAGAT
GACCGAACCCCCGTCAAGCCATGCCAATTGCAGTGACAGCTCCTCTTCTG
CCTCTAAGCAGGAGGGCATAAAGTTACTAATGCAGATCCACCAGGACAAA
AACGAACTCATGGAATCCTTCCGCGAGCTGATGGGAAGCCAGAGGACCCT
AAGTCACACACCGCCGCCCAAGGAGAAGAATCATGTGGATCTGTTTTTCG
AAAGCGTCAGTTCCAGCGTGAAAGCCCTCTCGCCAAAGTTGGTAGCGGAA
GCCAAGATGCGAGTATCGCAGCTGATCTGTGAGCTCGAGCTTCGCGGCCT
CAGTGAAACCAGCCAAACGGACGCACTGAATCCAAACCCTCAGCTAATGA
ATCGCTCGCACTGCGCCCATCAGCAAGCTTTCTAGACCATTCGTTTGCGC
GCGGGCCCAGGTTAGTGGTCATAATCATAATCATATCATAATCATATCCA
CAACTAGCCTAGGAGATCCTGTCATGACTAGGTGCTTGGAATTCCCACCA
ATAAAAAAACGCCCGGCGGCAACCGGAGGCGTTCTGGAACAATCAGATGG
GATCTTGAGGTCATTACTGGATCATCAACGGATC
UFO08576.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:29:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34149-RB | 1032 | CG34149-RB | 40..954 | 9..922 | 4550 | 99.9 | Plus |
| CG34149-RA | 1072 | CG34149-RA | 40..954 | 9..922 | 4550 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:28:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22380255..22381135 | 43..922 | 4355 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:28:59 has no hits.
UFO08576.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:12:36 Download gff for
UFO08576.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34149-RB | 31..960 | 1..926 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:33:49 Download gff for
UFO08576.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34149-RA | 31..960 | 1..926 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 18:01:54 Download gff for
UFO08576.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34149-RA | 31..960 | 1..926 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 18:01:54 Download gff for
UFO08576.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22380256..22381135 | 44..922 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:33:49 Download gff for
UFO08576.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18205978..18206857 | 44..922 | 99 | == | Plus |
