UFO08591.5prime Sequence
1131 bp (1017 high quality bases) assembled on 2011-07-29
> UFO08591.5prime
CAGTCGACATGAGTTCGCAATACTCGAATGTGGAGAACCTGTCGCCGCAG
ACGATAAGGCAGGTGATGAGGGAGCTGCAGGAGATGGAAACCACGCCACC
GGAAGGCATCAAGGTGCTAATCAATGAGAGCGATGTGACGGATATTCAGG
CATTGATCGATGGACCTGCTGGCACTCCGTACGCCGCTGGAATTTTCCGC
GTCAAACTGACGCTGAACAAGGACTTCCCGCTGACGCCACCCAAGGCGTA
CTTCCTCACCAAGATCTTTCATCCGAATGTGGCCGCCAACGGGGAGATCT
GTGTGAACACACTAAAGAAGGACTGGAAGCCGGATCTGGGCATCAAGCAC
ATTCTGCTCACCATCAAATGCCTGCTTATTGTCCCGAATCCGGAATCGGC
GCTGAACGAGGAGGCCGGCAAGATGCTGTTGGAACGATACGATGACTACT
CACAGAGGGCGCGCATGATGACAGAGATCCATGCCCAGCCTGCCAAATGC
GGTGTAGGCGCTGTTGGCGATGCCAAAGACGATGGTGGACCCTCGACGAA
GAAGCATGCGGGCCTGGACAAGAAGCTGCAGGACAAGAAGAAGGAGAAGT
TGCTCAAGGAGAAGAAACGCATGCTGAAGAGATTAGCAAGCTTTCTAGAC
CATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAA
TCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGC
TTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAAC
AAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCC
AAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCCCTCATCGCAGTAC
TGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAACGGCA
TGATGACCTGAATCGCCAGCGCATCAGCACCTGTCGCTTGCGTATAATAT
TTGCCATGTGAAACGGGGCGAAGAGTGTCATATGCCCGTTTAAATCAACT
GGGTGAACTCACCCAGGGATGGCCTGAACCGAAACATATTTCTCTATACG
TAGAGAGCAGTTCACCGTTAACGCCCCACTC
UFO08591.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:29:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8188-RD | 3297 | CG8188-RD | 568..1195 | 8..635 | 3140 | 100 | Plus |
| CG8188-RC | 2442 | CG8188-RC | 568..1195 | 8..635 | 3140 | 100 | Plus |
| CG8188-RB | 2119 | CG8188-RB | 568..1195 | 8..635 | 3140 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:29:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17701306..17701777 | 488..17 | 2360 | 100 | Minus |
| X | 23542271 | X | 17701019..17701167 | 635..487 | 745 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:29:21 has no hits.
UFO08591.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:12:41 Download gff for
UFO08591.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8188-RB | 745..1379 | 1..635 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:34:05 Download gff for
UFO08591.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8188-RA | 745..1379 | 1..635 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 18:02:08 Download gff for
UFO08591.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8188-RB | 561..1195 | 1..635 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 18:02:08 Download gff for
UFO08591.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17701019..17701165 | 489..635 | 100 | <- | Minus |
| X | 17701306..17701777 | 17..488 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:34:05 Download gff for
UFO08591.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17595052..17595198 | 489..635 | 100 | <- | Minus |
| arm_X | 17595339..17595810 | 17..488 | 100 | | Minus |
