UFO08592.5prime Sequence
1106 bp (951 high quality bases) assembled on 2011-07-29
> UFO08592.5prime
CAGTCGACATGCTAGATCTGGAGATCGTGCCGGAGATTTCCCTGGGCTGC
GATGCCTGGGAATTTGTGCTGGGCATGCACTTCTCGCAGGCTATCGCCAT
CATCCAGTCGCAGGTGGGCATCATCAAGGGAGTCCAGGTGCTGTACTCGG
ATACCACTCCCCTGGGCGTGGACATCATTATCAACCTGCCACAGGATGGC
GTTCGCTTGATCTTTGATCCCGTCAGTCAGCGTTTGAAGACCATCGAGGT
TTTCAACATGAAACTGGTGAAGCTGCGGTATTTCGGCGTATACTTCAATT
CCCCGGAGGTGCTGCCGAGTATCGAGCAAATCGAGCACTCCTTTGGAGCC
ACACATCCTGGGGTTTACGATGCAGCCAAACAATTGTTTGCTCTACACTT
TCGCGGGCTGAGTTTCTACTTTCCGGTGGACAGCAAGCTGCACTCGGGCT
ACGCCCATGGACTGAGTTCTCTGGTTTTCCTGAATGGCGCCTCACCCGTC
GTGTCCAAGATGTCTCTCTACGCAGGCAGCAATGTGTTGGAGAACAGGGT
ACCATCTCTTCCCTTGTCCTGCTATCACCGCCAGATGTATTTGGAATCGG
CCACTGTTCTCCGAAACCGCCTTTGGTCACACGAAGGGTCTGAAGCTGAA
GCTCTTTACTGAGGGTTCAGGAAGGGCTTTGGAGCCACGCCGTCAGTGCT
TTACGCGAGAGCTGCTCTTCGGCGATAGCTGCGAGGATGTGGCCACCAGT
CTTGGAGCACCAATCGTATATTCTTCAGAGCGAGGACAAAATGAAAAATA
CACAGCTCGAGTGTCAATCGACAAGCACAGAGCAAGCGAAGCGATATTTT
CTTTACTACTTTACACTTGGCATCGATGTGCTCTTTGATGCACGGACCGC
AGACCTGCAAGAAATTCATTCTGCACACCAACTACCCCGGTCACTTCAAC
TTTAATATGTACCATCGCTGCGAGTTCAGGTCCCTGCTGCAGCGGATCAC
CCTTCGATGATGATAATGGTCACGATTTGGTGACCGCCGACTAGCAGGAA
CATGGTGAACATACGCTAACCCAATGGGACGCGATATCGCAGGCATGCAC
CCTCAG
UFO08592.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:29:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7083-RA | 2029 | CG7083-RA | 306..1387 | 9..1085 | 4980 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:29:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8341153..8342200 | 9..1054 | 4685 | 98.6 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:29:24 has no hits.
UFO08592.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:12:41 Download gff for
UFO08592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7083-RA | 300..1398 | 3..1096 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:34:07 Download gff for
UFO08592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7083-RA | 300..1398 | 3..1096 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 18:02:11 Download gff for
UFO08592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7083-RA | 300..1398 | 3..1096 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 18:02:11 Download gff for
UFO08592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8341144..8342245 | 1..1096 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:34:07 Download gff for
UFO08592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8334244..8335345 | 1..1096 | 97 | | Plus |
