UFO08607.5prime Sequence
1130 bp (989 high quality bases) assembled on 2011-08-05
> UFO08607.5prime
CAGTCGACATGCTTTTAATAAGGAGTCTAGTAATTGTGTTTTTAGTAGCG
ATAAGCGAGTTCGATCGAAACTTTGCCATAAACCATGACAATGCTGGAAT
AGTTCTAAGGGAAATAAACAAGAGAAGAGATCGCCATGGAGTCCCAAAAT
TGACATTGGACAACGTGCTCAGTAAGGGATGCCAAAGTTATGCTTGGAAA
CTGTCCAAGTCGGCGACTCTTAACTATTCGGACCCCACTAACAAGGATTA
CACAGAAAGCATCTGCAGATTTGAAGTAAAGAGGGGAGCACTGTCGAGAT
GTGTCAAGAACTGGTATAATGGAAGGAAGTTCGATATTTTAGACCCCAAG
GCTAAAGATTTTACTGCCATGATTTGGAGGTCGTCCGTTTCCTTGGGATA
TGGCGACGCTAACATAAATTTTTCTTCGTTGGCACATCGTAGGCACCGAA
CGCTCGGACATGTTCCCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGG
GCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAA
CTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAA
AAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCT
GAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAA
ATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGC
ATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGC
CAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGA
AAACGGGGGCGAAGAGTTGTCCATATTGGCCACGTTTAATCAAACTGGTG
AACTCACCCAGGGATTGGCTGAGACGAAAAACATATCTCATAACCCTTTA
GGAATAGGCCAGGTTTCACCGTACACGCCACATCTGCGAATATAATGTTG
TAGAACTGCCGAAATCGTCTGCTATTCACTCCAGAGCGATGAAACGTTTC
AGGTTGCCTCATGAACGGTGTACCAGGGTGAACACTATCCATATACACAC
GTTACGCCTCATGGCCTATCGACGTCGATG
UFO08607.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:35:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31286-RB | 1834 | CG31286-RB | 91..501 | 9..419 | 2055 | 100 | Plus |
CG31286-RB | 1834 | CG31286-RB | 898..950 | 415..467 | 250 | 98.1 | Plus |
CG1315-RB | 1456 | CG1315-RB | 1256..1304 | 467..419 | 245 | 100 | Minus |
CG1315-RA | 1409 | CG1315-RA | 1256..1304 | 467..419 | 245 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:35:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 6641621..6641842 | 197..418 | 1110 | 100 | Plus |
3R | 32079331 | 3R | 6641426..6641565 | 58..197 | 700 | 100 | Plus |
3R | 32079331 | 3R | 6641322..6641372 | 9..59 | 255 | 100 | Plus |
3R | 32079331 | 3R | 6642414..6642462 | 419..467 | 245 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:35:25 has no hits.
UFO08607.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:14:36 Download gff for
UFO08607.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31286-RB | 91..501 | 9..418 | 99 | -> | Plus |
CG31286-RB | 902..950 | 419..467 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:25:54 Download gff for
UFO08607.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31286-RB | 91..501 | 9..418 | 99 | -> | Plus |
CG31286-RB | 902..950 | 419..467 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:43:29 Download gff for
UFO08607.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31286-RB | 91..501 | 9..418 | 99 | -> | Plus |
CG31286-RB | 902..950 | 419..467 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:43:29 Download gff for
UFO08607.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 6641622..6641842 | 198..418 | 100 | -> | Plus |
3R | 6642414..6642462 | 419..467 | 100 | == | Plus |
3R | 6641322..6641372 | 9..59 | 100 | -> | Plus |
3R | 6641428..6641565 | 60..197 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:25:54 Download gff for
UFO08607.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 2467044..2467094 | 9..59 | 100 | -> | Plus |
arm_3R | 2467150..2467287 | 60..197 | 100 | -> | Plus |
arm_3R | 2467344..2467564 | 198..418 | 100 | -> | Plus |
arm_3R | 2468136..2468184 | 419..467 | 100 | == | Plus |