Clone UFO08607 Report

Search the DGRC for UFO08607

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:86
Well:7
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO08607.5prime Sequence

1130 bp (989 high quality bases) assembled on 2011-08-05

> UFO08607.5prime
CAGTCGACATGCTTTTAATAAGGAGTCTAGTAATTGTGTTTTTAGTAGCG
ATAAGCGAGTTCGATCGAAACTTTGCCATAAACCATGACAATGCTGGAAT
AGTTCTAAGGGAAATAAACAAGAGAAGAGATCGCCATGGAGTCCCAAAAT
TGACATTGGACAACGTGCTCAGTAAGGGATGCCAAAGTTATGCTTGGAAA
CTGTCCAAGTCGGCGACTCTTAACTATTCGGACCCCACTAACAAGGATTA
CACAGAAAGCATCTGCAGATTTGAAGTAAAGAGGGGAGCACTGTCGAGAT
GTGTCAAGAACTGGTATAATGGAAGGAAGTTCGATATTTTAGACCCCAAG
GCTAAAGATTTTACTGCCATGATTTGGAGGTCGTCCGTTTCCTTGGGATA
TGGCGACGCTAACATAAATTTTTCTTCGTTGGCACATCGTAGGCACCGAA
CGCTCGGACATGTTCCCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGG
GCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAA
CTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAA
AAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCT
GAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAA
ATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGC
ATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGC
CAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGA
AAACGGGGGCGAAGAGTTGTCCATATTGGCCACGTTTAATCAAACTGGTG
AACTCACCCAGGGATTGGCTGAGACGAAAAACATATCTCATAACCCTTTA
GGAATAGGCCAGGTTTCACCGTACACGCCACATCTGCGAATATAATGTTG
TAGAACTGCCGAAATCGTCTGCTATTCACTCCAGAGCGATGAAACGTTTC
AGGTTGCCTCATGAACGGTGTACCAGGGTGAACACTATCCATATACACAC
GTTACGCCTCATGGCCTATCGACGTCGATG

UFO08607.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:35:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG31286-RB 1834 CG31286-RB 91..501 9..419 2055 100 Plus
CG31286-RB 1834 CG31286-RB 898..950 415..467 250 98.1 Plus
CG1315-RB 1456 CG1315-RB 1256..1304 467..419 245 100 Minus
CG1315-RA 1409 CG1315-RA 1256..1304 467..419 245 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:35:24
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 6641621..6641842 197..418 1110 100 Plus
3R 32079331 3R 6641426..6641565 58..197 700 100 Plus
3R 32079331 3R 6641322..6641372 9..59 255 100 Plus
3R 32079331 3R 6642414..6642462 419..467 245 100 Plus
Blast to na_te.dros performed on 2014-11-26 23:35:25 has no hits.

UFO08607.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:14:36 Download gff for UFO08607.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31286-RB 91..501 9..418 99 -> Plus
CG31286-RB 902..950 419..467 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:25:54 Download gff for UFO08607.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31286-RB 91..501 9..418 99 -> Plus
CG31286-RB 902..950 419..467 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:43:29 Download gff for UFO08607.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31286-RB 91..501 9..418 99 -> Plus
CG31286-RB 902..950 419..467 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:43:29 Download gff for UFO08607.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 6641622..6641842 198..418 100 -> Plus
3R 6642414..6642462 419..467 100 == Plus
3R 6641322..6641372 9..59 100 -> Plus
3R 6641428..6641565 60..197 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:25:54 Download gff for UFO08607.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 2467044..2467094 9..59 100 -> Plus
arm_3R 2467150..2467287 60..197 100 -> Plus
arm_3R 2467344..2467564 198..418 100 -> Plus
arm_3R 2468136..2468184 419..467 100 == Plus