Clone UFO08613 Report

Search the DGRC for UFO08613

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:86
Well:13
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG31679-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO08613.5prime Sequence

768 bp (768 high quality bases) assembled on 2011-08-05

> UFO08613.5prime
CAGTCGACATGTCCTTTAGCGAATCAAATGTTCATCAGTGGGCTTTATGT
GCCCTTGCGGGAGTAACCGGGTTTGTGTGTGGAGCCTTTGTCCAACAAGA
GGCGTCCATAAGGCAGCTGCTCCAGCAGATTCGAAGGGATCCCTATGTCT
ACCATCATCGTCACAAGTTATATCCGATGTTATCCACCTTTGGGACAGAC
CATGAGGCCCGTTTGTGGAATCGTCCTACTTCATGGGCCGACAAATTCAG
GGAGCTGGTATTATCACCGATCCTCGATTTAGTTAGTGCTACTGTGACGC
TGAAATGGGATTCGGCAACCACAACTGATCTGCTCGACCTAGTCAAGTAT
GGACTGCCCAGCACGGAGAACTTGTACGTCCATAAGGACTACGTGGTTTC
GCAGGACCTGCGCACGAACGGCGTCTTATGGATTTGTGAGCATTTCCGTG
GGGATTATCAAAGGGTATCGTCGGATGGAGGCGGATATAGCACCATGAAT
CTTCGCTACAATGATGTGTATGTGCTGAGCTGCGGTTCGATGAGCATATG
CAAGGCGTTCAAGCGGAAAATCTGGAACGATCTGGAGAACTACGTGTCCA
GCATGGCCAAGGAGTTTGGCTCAGTGTACGCCTACACTGGGCCGATATAC
ACCCCAACATGTTACGAGATTGGCAAATGGACCATGAAGTATGAGGTGTT
TGACTGGATTCCGATACCAGTGCCATCCCATTTCTTTAAGGTATTAATCG
TGGAGAGTGGAGTTCCGG

UFO08613.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:35:38
Subject Length Description Subject Range Query Range Score Percent Strand
Tengl3-RA 1114 CG31679-RA 45..804 9..768 3770 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:35:36
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2237386..2237975 768..179 2920 99.7 Minus
2L 23513712 2L 2238037..2238207 179..9 855 100 Minus
Blast to na_te.dros performed on 2014-11-26 23:35:37 has no hits.

UFO08613.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:14:38 Download gff for UFO08613.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31679-RA 45..804 9..768 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:27:27 Download gff for UFO08613.5prime
Subject Subject Range Query Range Percent Splice Strand
Tengl3-RA 45..804 9..768 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:43:33 Download gff for UFO08613.5prime
Subject Subject Range Query Range Percent Splice Strand
Tengl3-RA 45..804 9..768 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:43:33 Download gff for UFO08613.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 2237386..2237974 180..768 99 <- Minus
2L 2238037..2238207 9..179 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:27:27 Download gff for UFO08613.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2237386..2237974 180..768 99 <- Minus
arm_2L 2238037..2238207 9..179 100   Minus