UFO08613.5prime Sequence
768 bp (768 high quality bases) assembled on 2011-08-05
> UFO08613.5prime
CAGTCGACATGTCCTTTAGCGAATCAAATGTTCATCAGTGGGCTTTATGT
GCCCTTGCGGGAGTAACCGGGTTTGTGTGTGGAGCCTTTGTCCAACAAGA
GGCGTCCATAAGGCAGCTGCTCCAGCAGATTCGAAGGGATCCCTATGTCT
ACCATCATCGTCACAAGTTATATCCGATGTTATCCACCTTTGGGACAGAC
CATGAGGCCCGTTTGTGGAATCGTCCTACTTCATGGGCCGACAAATTCAG
GGAGCTGGTATTATCACCGATCCTCGATTTAGTTAGTGCTACTGTGACGC
TGAAATGGGATTCGGCAACCACAACTGATCTGCTCGACCTAGTCAAGTAT
GGACTGCCCAGCACGGAGAACTTGTACGTCCATAAGGACTACGTGGTTTC
GCAGGACCTGCGCACGAACGGCGTCTTATGGATTTGTGAGCATTTCCGTG
GGGATTATCAAAGGGTATCGTCGGATGGAGGCGGATATAGCACCATGAAT
CTTCGCTACAATGATGTGTATGTGCTGAGCTGCGGTTCGATGAGCATATG
CAAGGCGTTCAAGCGGAAAATCTGGAACGATCTGGAGAACTACGTGTCCA
GCATGGCCAAGGAGTTTGGCTCAGTGTACGCCTACACTGGGCCGATATAC
ACCCCAACATGTTACGAGATTGGCAAATGGACCATGAAGTATGAGGTGTT
TGACTGGATTCCGATACCAGTGCCATCCCATTTCTTTAAGGTATTAATCG
TGGAGAGTGGAGTTCCGG
UFO08613.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:35:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tengl3-RA | 1114 | CG31679-RA | 45..804 | 9..768 | 3770 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:35:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2237386..2237975 | 768..179 | 2920 | 99.7 | Minus |
2L | 23513712 | 2L | 2238037..2238207 | 179..9 | 855 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:35:37 has no hits.
UFO08613.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:14:38 Download gff for
UFO08613.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31679-RA | 45..804 | 9..768 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:27:27 Download gff for
UFO08613.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tengl3-RA | 45..804 | 9..768 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:43:33 Download gff for
UFO08613.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tengl3-RA | 45..804 | 9..768 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:43:33 Download gff for
UFO08613.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2237386..2237974 | 180..768 | 99 | <- | Minus |
2L | 2238037..2238207 | 9..179 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:27:27 Download gff for
UFO08613.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2237386..2237974 | 180..768 | 99 | <- | Minus |
arm_2L | 2238037..2238207 | 9..179 | 100 | | Minus |