UFO08615.5prime Sequence
1122 bp (1019 high quality bases) assembled on 2011-08-05
> UFO08615.5prime
CAGTCGACATGTCTAGGAACTATGGACCTGGACCTGGAGCCTACATGCTA
CCCAGCAGTTTTGGACAAAAAGGACCTCAGTTCTCCTTCGGCCGCAGAAT
TGACCGCAAAAGAGATGAAAAACCTGGTCCGGGTCCTGCTGCTTATAAGG
TGGATAAAGTGACACGCTACGGAAACGCGGAGGGTCCACAGTTTTCCATG
TATGTTAGGAACTCCAAGATGAAACCCCTCCCCATTCGATTGTCTGCAAG
CTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATC
ATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCA
TGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAG
CGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCA
ACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTC
ATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCAT
CACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCG
CCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTC
CATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGG
CTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGG
TTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCG
GAAATCGTCGTGGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCT
CATGGAAAACGGTGTAACAAGGGTGAACACTATCCCATATCACCAGCTCA
CCGTCTTTCATTGCCATACGAAATTCCGATGAGCATTCATCAGCGGCAAG
AATGTGATAAGCGGATAAACTTGTGCTTATTTTTCTTACGTCTTAAAAGC
GTATATCAGCTGACCGTCTGTATAGTAAATGGAGCACTGACTGATGCTCA
ATGTTCTTTACGATGCATGGGATTATCACGTGTATCCAGTGATTTTTCCA
TAGCTCTTAGCTCTGAGATCCT
UFO08615.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:35:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31870-RD | 1097 | CG31870-RD | 129..367 | 7..245 | 1180 | 99.6 | Plus |
| CG31870-RA | 478 | CG31870-RA | 129..367 | 7..245 | 1180 | 99.6 | Plus |
| CG31870-RE | 537 | CG31870-RE | 205..426 | 24..245 | 1095 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:35:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10790426..10790647 | 24..245 | 1095 | 99.5 | Plus |
Blast to na_te.dros performed 2014-11-26 23:35:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 232..299 | 814..881 | 123 | 68.1 | Plus |
UFO08615.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:14:39 Download gff for
UFO08615.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31870-RA | 103..355 | 1..253 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:27:54 Download gff for
UFO08615.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31870-RA | 123..375 | 1..253 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:43:35 Download gff for
UFO08615.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31870-RA | 123..375 | 1..253 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 00:43:35 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 14:27:54 has no hits.
