UFO08616.5prime Sequence
1130 bp (964 high quality bases) assembled on 2011-08-05
> UFO08616.5prime
CAGTCGACATGGGAAACAAGCTGCGCCGCCAACCACAAAGAGTTGAAGTT
GACGAGGAGGAGGTGAGATCCGACCGACCCCAGAAGAAGCCACCATCGTC
ATGGCCCTTCTGGCGCCTGGTCTACTGGCTGGGAGTCCTCATCATGGTCA
TCGGCATCGGTGTGGGCATGTACTTCACCCTCAAGTCGGACTTCGGTGAG
TGCTCCTCCTACGACGTCCGTTGCGATGCAAGCTTTCTAGACCATTCGTT
TGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATC
ATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTC
TCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAG
ATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGC
TCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAA
TTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAA
CCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTG
CCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAA
ATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAACATATT
CTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCC
ACATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGCGGTATTC
ACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGAAAACGGTGTAAC
AAGGGTGAACACTATCCCATATCACCAGCTTCACCGTCTTTCATTGCCAT
AACGAAATTCCGGAATGAGCATCCATCAGGCGGGCAGATGTGAATAAAGG
CCGGGATAAACCTTGTGCTATATTTTTCTTTACGGTCTTAAAAGCCGTAT
ATATCCAGGCTGAACGGGCTGGGTTATAGGTACCATTGAGCACTGACTGA
AATGCCTCAAATCTTCCTTACGATGCCCATTGGGAATATCACGGTGTTAA
TCAGGATTTTTTTCTCCCAGTCTAACCTCC
UFO08616.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:35:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17580-RA | 1086 | CG17580-RA | 85..303 | 9..227 | 1095 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:35:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12806698..12806916 | 9..227 | 1095 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 23:35:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 232..299 | 796..863 | 123 | 68.1 | Plus |
UFO08616.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:14:40 Download gff for
UFO08616.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17580-RA | 15..240 | 1..227 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:28:23 Download gff for
UFO08616.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17580-RA | 78..303 | 1..227 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:43:36 Download gff for
UFO08616.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17580-RA | 78..303 | 1..227 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 00:43:36 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 14:28:23 has no hits.
