UFO08617.5prime Sequence
1132 bp (1038 high quality bases) assembled on 2011-08-05
> UFO08617.5prime
CAGTCGACATGGAGACCTCGGAAGCGGTGAATACGTGTGAGGAGGGAGAC
CAGCTGAACGGCTCCTTCCGCCTGCAGTGCTCGATGTCCTCCGTGGATAT
GGAGAGCGAGAGTGACCTCTCGCTGGCATTCGAGCGCGAGGAGCAAATAC
CGGATGGCGGCTGCGACGAGCTGCCGGCCTTCGAGATCCGCGCCTTCTCG
CCGCATGGACGCACCCCGTCGCCCATCGACGATCTCGATCTGTCGGACAT
CGAGACGCCCAAGCAGCCGCAGAGGCAGCATCTCCTTCCGGAAGAGGAAC
CCCAGAACGATCCTCAGTACGTTGCCCTACACGAGATAAACGCCCAGATC
AGCCCGCCCAATGACGCCGACGACTCCAACAGCTTGGAGACGATCTTCGA
GGGCGTTTTCCTGAGCACCCCGCCCCGCGATAAAGCTTCCAGCTCGGGCA
ATTCCCGATTTACGCCCAAGCGCGGACGTGCAAATCTCATCGAGCTGATG
GCCAACCGGCTGCACGGCGGCAAGGAGAACCAGTCGCCGGGAGCGCGAGT
CTCTGACCCGCATTTACCCTCGCCACTCAAGGACCCCACCGCAAGCTTTC
TAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAAT
CATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACT
AGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTC
TGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGG
AGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGC
AGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAA
ACGGCATGATGAACCTGAATCGCAGCGGCATCAGCACCTTGTCGCTTGCG
TATATATTTGCCCATGGTGAAACGGGGCGAGAGTTGTCCATATTGGCCAC
GTTTAAATCAAACTGTGAAACTCACCAGGGATTGGCTGAAAACGAAAAAA
CATATTCTCATAACCTTAGGAAATAGTCAGTTTCACGTACCGCCCACTCT
GCATATTGGTAAACTGCGGAATCGGTCTTGCA
UFO08617.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:35:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14561-RB | 1310 | CG14561-RB | 227..808 | 9..590 | 2910 | 100 | Plus |
| CG14561-RA | 1061 | CG14561-RA | 227..808 | 9..590 | 2910 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:35:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22066133..22066714 | 9..590 | 2910 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:35:49 has no hits.
UFO08617.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:14:40 Download gff for
UFO08617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14561-RA | 185..773 | 1..590 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:28:53 Download gff for
UFO08617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14561-RA | 220..808 | 1..590 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:43:38 Download gff for
UFO08617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14561-RA | 220..808 | 1..590 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:43:38 Download gff for
UFO08617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22066126..22066714 | 1..590 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:28:53 Download gff for
UFO08617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22059226..22059814 | 1..590 | 99 | == | Plus |
