UFO08620.5prime Sequence
1121 bp (1014 high quality bases) assembled on 2011-08-05
> UFO08620.5prime
CAGTCGACATGACTCTGCTTTCGGGCGCCAACTCGGTGGGATATCCCAGT
CAAATGCCGGCGAAAAGGATCAGCTGGCGGCGTTTGGTGGCACTACTGCC
GAATTCGATAGGTTTGTCATTAAAACCGGTGACGCCTCATTTGAGGGACC
TACATCTCGTCCAGCGCCGTCTCCAGGACGATTTTCTGGGCTGTGAGGCT
CTGTGGACAATTTTTATGGCCGCCGCCTGGAGTTATCGCTACAGAACGCG
GCTGAGACCATTTCCCAGCCACTGGAATACCATAGATTTGGTTTTTAATA
CGCTGGGTGATGCACCCAGACTGGAGGTGCTGCAGCAGCAGCTCATGCAC
TGCGACTATCAGGCCTGCTCCCCCAATGTGGTTCGTTTGCTAACGGACAT
CCTGGTGGATCAGGCCGATCGCGTGTCCTTGAGCTCACTGCGACCCTGCG
AGTTCCAGGAGCTGTACGCTCACCTGGGCATGTCGCCGCCCAAGCAGCCA
CCCACCCAGATCTTTGAGGTGCGAACAGGCAAGGGCAATGAGAAGGGGGA
GGCATATGCCAGTTTGCGGCAAGAGAACAAGGAATCCGTTCGCCTGGGCT
TCTATGGCTGCAAGCTAGAGAAGGTTTATGCGCTTCTGAATTCCCAAAAT
TCCCTGGACAATGGAAAGTATCTGGAGCTAACCTGCGATATCAATGAAGC
CCTGGCCAGGAGTAAGCCCCAGGCTGGCGTGGGTGGCTCCCGTTGCGGAT
CGATACTGCGTTGCGTGGCTGTGGTAGAGTTCGTCTTCCAGGACAATGAA
ACCAGCCGCGATAAGAAGCAAGTGATCATCAAGGATGCGAACACCATGCA
CGTATCGTATCTACTATTGTACGGCCAAAGCTGCATGAATACGCAATGGA
GCGACAGATCAAGCTGATGGCGGAGCCAGCTCGAGACTGCTCAATTGCTG
GAAAGATACCACAAGAAGCCATATCCTTGGGCGTGACTGCTGATCGTTTC
ATCGATGCCCATTTCGAGCACTTTCTTTCGCTGTTGCTCCGCACTGGCTC
TACGTATTCCAGCGAGGTATTTGCCAAGCTCTAGAACATCGTTTGGCGCG
CGGGCCCAGTAATGGTCTATT
UFO08620.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:33:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15925-RA | 1527 | CG15925-RA | 279..1361 | 1..1072 | 4995 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:33:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16446264..16447346 | 1..1072 | 4770 | 98 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:33:17 has no hits.
UFO08620.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:14:10 Download gff for
UFO08620.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15925-RA | 279..1366 | 1..1077 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:09:19 Download gff for
UFO08620.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15925-RA | 279..1366 | 1..1077 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:42:39 Download gff for
UFO08620.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15925-RA | 279..1366 | 1..1077 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:42:39 Download gff for
UFO08620.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16446264..16447351 | 1..1077 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:09:19 Download gff for
UFO08620.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12333769..12334856 | 1..1077 | 97 | | Plus |
