UFO08628.5prime Sequence
1121 bp (1034 high quality bases) assembled on 2011-08-05
> UFO08628.5prime
CAGTCGACATGTTCAAGTCCAAGTCCTTCGATTTGGTCATTGAGGAAAAG
ACAAAGAAACCGGAACGGCTCTACCAACCTCGTCGGATGCGATGGCTTAA
ATATATCATCCTGCCGGCAGTCTTCTCCTTTGCGCTTCTGCTGATCCTGG
TCAATGTGGACTTCTCCGATAATAGTGAGGATTCCACGCATCTGGGCAAT
GACACATCGCTCATTATATCTGGCTATGGATTTGAAAATAACACACTGCG
CCGGGGATTTTTCTCCGGAGGAATTGCATTGCATAGCCTTGTCATCGAGA
ACTGCACCATAGTTCATATCAACGACGCAGCTTTTAATCAGGAAAGCACT
GTGAACATAACAAGCCTGCAGCTCATTAATGTGCAATTGGAAAACTTGAC
TGAATCTGCCCTGGAAGGTCTTCAAAAGCTTCAGAACTTTACTCTAGTCA
ATGAAAATAATCACTTCAGGCCATTTGGATTCCTCTCAGCTGTGGCTGAA
TCGTTAGTCAGTGCGGAAATCCACCAGTCACTAGCCGCGGCAATATCGTA
TTCAGTGTGCGATTTTTTGGGATCCCGGAATTTCCCACAGTTGAAATATT
TAGATCTGAGTGGCACACACTTGGACAAAAGCCTTATTAAAGAGTCCTTT
GACAATCTGCCCGCGTTGGAACAACTACTTCTAAGGAACTGTGGGTTGGG
CAACATCGAGTGGGAAATCGTGAGGCCAAGACTCAAATTGTTGCACTATT
TGGACTTGGGTGGAGCTCAAAAGACGGGCAACTATGAACATCAGTTGGAC
GTATCCGCGTTCTCTCCTGAGACAACTACTAACGCTGAAGAGATATCTAC
TATCCTAGCGAAGAGAGCGATGGCTCCAGAAGTAGTGGGGCACCCACTAC
ACTAGGACCTACTACTTCCATAGAAATTTCACCACCATCAACACAAAGTA
CACACACCCAAAGAAGAAAGTACATCTATGACAGAAACAACGATATTAAC
ACACCATCGCAAATGCGAGAGGACTTTGCAGGATCTTAGAGGGCCCAGAA
TACACCGATACGTGCATCTGCAGATCTGGGAAATCGTCTGCAGATGTTTA
CTGTGTGAATCTGCAATCGAC
UFO08628.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:33:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14662-RA | 2000 | CG14662-RA | 170..1260 | 9..1088 | 5035 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:33:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4983071..4984063 | 1001..9 | 4785 | 99.2 | Minus |
Blast to na_te.dros performed 2014-11-26 23:33:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| F-element | 4708 | F-element F 4708bp | 3672..3735 | 924..987 | 113 | 64.1 | Plus |
UFO08628.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:14:14 Download gff for
UFO08628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14662-RA | 164..1279 | 1..1103 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:12:20 Download gff for
UFO08628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14662-RA | 164..1279 | 1..1103 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:42:46 Download gff for
UFO08628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14662-RA | 164..1279 | 1..1103 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:42:46 Download gff for
UFO08628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4982954..4984069 | 1..1103 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:12:20 Download gff for
UFO08628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 808676..809791 | 1..1103 | 97 | | Minus |
