UFO08630.5prime Sequence
1136 bp (1006 high quality bases) assembled on 2011-08-05
> UFO08630.5prime
CAGTCGACATGGTGAGCATTGATCCTATAATATTCCAAGTATACCACAAG
CGTGTGGTAAAGATGCTGCTTTCAACTCTGGCCAGGATGCTGATCGTGTC
CAGCTTTCTGGCGGATGCCATGCACATCTGCCAAAACTGGCGACTGGAGC
AGAGCATTTTGAACATTAACTGTGGATGCGGGCGGATTGCGGCTGGAGTG
TGCATCAACCTGATGGCGATTGGACAATTTGTTGGCTCCGTGCTGATTGT
GACCGGAAAGAGGATTTATGCGGGGACAGGACTGCTTTGGCTGGCAGGTT
ACCTTCGGATAGCCCTCAATCCGACGCAGCGAAACCTCGCCAAGTACTTC
CAGGTGTGCAATGTGATCAGTGCCTTGATGGTCATAATGCTGAGGTCTCG
ACGCACCGCCGTTGTCGCGTTCCTGCTGCTTACCTTCGTGAACTGGAAGG
ATATGGAGCGGCATTTGTGGCTCGTCTTTTATAATTTCGGGGAGCAGCTT
TTGGGTCATCAGAAAAAGGACCCCGTGGGACTGATGGGCCTACAGCATGT
GGGCATGCAAATCTTGGATGATCCTTCTTTGGCCTCGAGGGAAAGTTTCT
GGCACAAAGTATCCGTGGCTGGCGGATTTATCTTTATTGTCGTGAATGGA
CATCTGCATATCATGTTTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCG
GGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACA
ACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATA
AAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTC
TGAGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAA
ATTACGCCCCGCCCTGCACTCATCGCAGTACTGTTGTAATTCATTAAGCA
TTCTGCGACACAGCCATCACAAACGCATGATGACCTGATCGCAGCGCATC
AGCACCTTGTCGCCTTGGCGTTTAATATTTGCCCATGTGAAACCGGGGGC
CAAGAAGTGTCCATATGCCACGTTAATCAACCTGGTGACTCACAGAATGC
CTGAAACGAAAACATTCCATACTAGGATTGGCAGGT
UFO08630.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:33:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17207-RA | 1323 | CG17207-RA | 70..729 | 9..668 | 3300 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:33:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12438411..12439070 | 668..9 | 3300 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:33:45 has no hits.
UFO08630.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:14:16 Download gff for
UFO08630.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17207-RA | 70..740 | 9..681 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:13:23 Download gff for
UFO08630.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17207-RA | 70..740 | 9..681 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:42:48 Download gff for
UFO08630.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17207-RA | 70..740 | 9..681 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:42:48 Download gff for
UFO08630.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12438400..12439070 | 9..681 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:13:23 Download gff for
UFO08630.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8264122..8264792 | 9..681 | 99 | | Minus |
