UFO08632.5prime Sequence
1107 bp (1003 high quality bases) assembled on 2011-08-05
> UFO08632.5prime
CAGTCGACATGAGCAGTCTGATCAACTTCCTCAACCCAAAGCTTAAGCCC
TCCGTAGAGACCGATGCCGTCTGCGAGGATGGCTACACTGCGGCCAATCT
GGTGGCCGACGACGTCGAGCAGCTGGAGCGTGGATTCATGTGCTTCGCCG
TCTGCAAGCCGCCCATAGAGATCGTATTCGACTTCCCCAAGGCGGTGGAC
ATGAAGGTCATCAAGCTGTGGCCCTCCTGCGGAGCCCTACGATCCACTGC
CTTCGAGCTGCATGGACGACACGATGGTATCTGGGAAAGGGTTGCCTTCG
TACGCGATCTGGGGCGTGGCGTGGACTCGGTGACCTTCTGCTACCAGAGC
GACTACAACTCACGGAGCAGCTCCAACTCGGAGCAGAGCGAGAAGGTGTT
CTTCTTCAAGTCCGCCCACAAGATCCTTGCCAGCACAAACAGCGTCAAGG
TGGTGATCCGGGCCACGGAAAGGTGTCCTCCAGTGCTGAGGAAAGTTCAG
ATGTGGGGACTGCCCGCTCGTTCGCTGGACAAAGCCGATCGCGAGCTGGT
CAAGACCATCTGGAGCGAGATAAGCGATCCCTACGGCCAGAGGGACGCGG
CCCAAACGCCCACCGGGCAGAGATCACCACCGCGGAATGTTCCAGAGCTC
AGGGACCAGTCGACCCTCTCTATTCCTGAAGAGTTCCTCGACTCCATCAC
CTGAGAGCTAATGATCTTCCCCACCGTGCTGCCATCTGGAAAAGTGGTGG
ACCAGTCCACCATCGACAAGCACGCCGAGGAGGAGGCCAAGTGGGGTCGC
CAGCCCTCGGATCCGTTTACAGGCCTGGAGTTCAATGCGCAACGCAAGGC
GATTCTCCACCTGGCCCTAAAAGCGCGCATCGAGAAGTTCCTCATGGAGA
ATTCGGAGCACTTCAAGGCGGTGCCCCGTTCGCTGGGCACTTCTCGCAGC
GTCGTCGTCACGCTCGCAGTTCGCAGCAGCACTGTCAGCGGGACGATTAG
TCCGCTGCGATCTATCGCACTGACACGCCTACAGCAGCAGCAGCGAAGAG
CAGCACTGCCACGCCCATCCTCATCGCGCATCTCGGGGATTACGACTCGC
GCGGGGG
UFO08632.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:33:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2218-RB | 2198 | CG2218-RB | 339..1427 | 9..1076 | 4905 | 97.8 | Plus |
| CG2218-RA | 2529 | CG2218-RA | 437..1525 | 9..1076 | 4905 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:33:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30427136..30427840 | 713..9 | 3510 | 99.9 | Minus |
| 3R | 32079331 | 3R | 30426552..30426815 | 974..713 | 1205 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:33:52 has no hits.
UFO08632.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:14:17 Download gff for
UFO08632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2218-RA | 429..1514 | 1..1067 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:14:21 Download gff for
UFO08632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2218-RA | 429..1514 | 1..1067 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:42:50 Download gff for
UFO08632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2218-RA | 429..1514 | 1..1067 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:42:50 Download gff for
UFO08632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30426564..30426814 | 714..963 | 99 | <- | Minus |
| 3R | 30427136..30427844 | 1..713 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:14:21 Download gff for
UFO08632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 26252286..26252536 | 714..963 | 99 | <- | Minus |
| arm_3R | 26252858..26253566 | 1..713 | 99 | | Minus |
