UFO08637.5prime Sequence
1093 bp (1004 high quality bases) assembled on 2011-08-05
> UFO08637.5prime
CAGTCGACATGGATGAGTTCGGCGTCTTCGATTACAAGCGCCCTGCCAGC
GCTACAGATCCCGATTGGAGGACCTCGTACTATCGAGGGCATCGCCACAT
TACAGACTTGAGAATGGGTAACAAGCTGAACGCCAAGTTTACGGATAAGG
GTATTTATGTAAAAGATCCGCTGCTGTCCGAGAAGCCGACTTCTGAGTGC
ATGGCCAACTATGTGTGGCAGTATAACGATCCCAACGCACTTAGAAATCC
CTCGCTCAACATGAAAACACAGTATATGAAACCATTTGAGGAGGGTTCCC
TTCGCTTTGTAAAGCGAAAGATGAAGCCCATTTCTAGTGTCAGTCATGAG
TCGTATGTACTTAAGGAGCTGCCGGAGGAACAGGAAATATTGCCTGTAAC
AATGCCCACTCCGGTGGTAGCCACCAAGCTAGTCATCGACCGTTCGGAGG
CGTCCTTTAGCAAGTACCTTGATCCCTCCTCCACCACATACAATCTGTCG
TATGTGCGCTGGGGTCCCGAGGACTTGTGTGGCGGAGTAGCTGCCCACGA
CAATATTACATACTGGAATTGGACGGAGAAGATGCCGCCCATCCAGAAAG
TATCCCGCGAAGAGGATCCTACAATGTGTGACGAGGGTAATACGCATAAT
TGCCCAAAGCGACGCTGTGAGTTTCAAAACCTCACCAAACGAGTGCCGCA
TTCGGGAATGGTCACCGAGGTGCGCGCTAATTTCACGGATCCACAATTTC
GAAGGGTTGAATTCGATCCAGAAGTTAAGCCCATACTCGTGCACGAGGAA
GTCACTCCGTTTGCGGAGAAAAGCGAATACGGCATCTACGGATCGGGAGA
ACCAGTTATCAATACGTTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCG
GGCCCAGGTAAGTGTCATAATCATAATCATAATCATAATCATAATCACAC
TAGCCTAGAGATCCTGTCATGACTAGTGCTTGATTCCTCACAATAAAAAC
GCCCGCGCACGAGCGTTCTGAACAATTCAGATGGAGTCTGAGTCATACTG
GATCTTTCACGAGTCAAGCGAGCCTCGGATATCATTACGCCGC
UFO08637.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:34:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8292-RA | 1105 | CG8292-RA | 118..979 | 8..868 | 4270 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:34:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8216984..8217627 | 862..219 | 3205 | 99.8 | Minus |
| 2L | 23513712 | 2L | 8217687..8217900 | 221..8 | 1070 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:34:07 has no hits.
UFO08637.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:14:21 Download gff for
UFO08637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8292-RA | 111..984 | 1..876 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:16:24 Download gff for
UFO08637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8292-RA | 111..984 | 1..876 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:42:58 Download gff for
UFO08637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8292-RA | 111..984 | 1..876 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:42:58 Download gff for
UFO08637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8216972..8217624 | 222..876 | 99 | <- | Minus |
| 2L | 8217687..8217903 | 1..221 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:16:24 Download gff for
UFO08637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8216972..8217624 | 222..876 | 99 | <- | Minus |
| arm_2L | 8217687..8217903 | 1..221 | 98 | | Minus |
