UFO08638.5prime Sequence
1100 bp (976 high quality bases) assembled on 2011-08-05
> UFO08638.5prime
CAGTCGACATGGCGTTCTCCACACAAAAAGAGTTCTTTCACGTACCCTTC
AACAATGAGACATACGAATTTGAGTGTGTCGATGCGTGTGTTAAACTTAA
GAGGTATCCATCCACAGTTGACGACAGATCATGGTCAGCAAACGAAGATA
TGAAGTCACAGTTCGTGGCTGACCTGGTGGCCTGCAACTCACCGATAAAG
AAGGACCGTGGTGCCGAGCCTACCGCTAGATCTGCTCCATTGGGTCCTGA
GGATGAGTACGGCAGTAATTTAGTGGTGGGCGACAGTTTAATAAATGCCG
CGGACGACACAATTGGTCGCATGCAGGATCTGATGATCAAGAATAATATT
CTAAAGAAGAAACTGGCCGATTCTGATGATAAATTGAGGACAGCCAACCA
GGAGACCGCCGAGATCAAGCGGATTATGGACCAGCGCTATGACCCCGACA
AGAGCAAGGCTCTAAAAAAGAAAATCAAGCAACTGGCCGATGACAACAAG
ATAACTCCGCAGGACGAGAAGGAACTGAACGGTCTGCAGGCGGCCATTGA
CGACATGAACAAGGCACACGACATCCTGGAGGCTGAAAATGCCAATCTAA
AGCGGCTGCTCGAAAAACAATCGAAGCGCTGCAAGATGGATAGCATTAAA
GTCGATCCGGAAAAGAGCAACGATATACCCTACCTGCAGAAGAAGATCGA
CGACTTGGGTAAGGAGGTGGCGCTACTGCGTGAGTTCGAGGACGAAGTCA
TGAAGCGTTGCGCCAAAAAGTGCGGTGCTGAACTGGTGGTGGGTGGGTGG
AGGTGGCAATGCTGGTCGTGCCGCTAGGGGTCCTCCTGGAAGGGCAGTTT
CTCGCCGGACAGGATGCCGAGAACATCAAAAGATTCTAGCCGATCGTGAT
GCCCTGCGAAGAAGTGTACGAACTGGAGGAGCTCGGCGACAAGTCAATCA
ACTGGAGGAGAGGCCATGAGCGGAGTGTCTGACTGCACTGTAGAAATCTA
CGGGAACAGTGCGATGCATGGAGCAATGCAGTGTGAATTGCCGAAAATTG
CCGAACTACTACTGAAAACGAGTATGACAAGGCTAGGTCAATGAGGAAAT
UFO08638.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:34:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31161-RB | 1666 | CG31161-RB | 180..1286 | 8..1100 | 4815 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:34:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22616690..22617796 | 8..1100 | 4340 | 96.5 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:34:11 has no hits.
UFO08638.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:14:22 Download gff for
UFO08638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31161-RB | 180..1286 | 8..1100 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:16:53 Download gff for
UFO08638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31161-RB | 180..1286 | 8..1100 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:42:58 Download gff for
UFO08638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31161-RB | 180..1286 | 8..1100 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:42:58 Download gff for
UFO08638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22616690..22617796 | 8..1100 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:16:53 Download gff for
UFO08638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18442412..18443518 | 8..1100 | 96 | | Plus |
