UFO08640.5prime Sequence
1096 bp (988 high quality bases) assembled on 2011-08-05
> UFO08640.5prime
CAGTCGACATGGATTCGAATTGCGATTTATCGATGGTCAATGGTCAAACG
GAGCCCAAAGACCCAAAATGGGCGTCGTCGTCAACCCAGATAACTTCTCG
GGCATCGGAAACCTTTTCCGGAGTTGGCTCGGCGATAAGCACTGAAACGT
CCTTGCAGCCAGTGGCCGCGCCCACGATGTACTGCCTCCGATTGGCGCAG
CAGAGGCCGATAACCGAACGGCACGTCCACTTTCATGCCGGCGTTATCGA
TAACGAGCACATGAACCGGCGCAAATCGAAATGCTGCTGCATCTATCGAA
AGCCACATCCTTTCGGCGAGAGTTCGTCCTCCACGGACGACGAGTGCGAA
CACTGCTTTGGTCATCCCGAAGTGAGAACTCGCAATCGGTTGGAAAAACA
GCGGATACAGGAACAGCAAAACGGGTGCTGTTGCTGTCATCATCACCATC
GACTTCATAGTAATCGGAATAATCGACCGCCTACCGAAGAGATCGCGCAG
CATAAGGATGATCTGGCCAAAGAGGAACCAAAATCGGTAGTCAACAATGA
AAGTAGTCTAAAACTTTTAAACGAGGAAAATGTAAAATCATCTAAACCAG
AAAAAAAAAATAATTCAAATAACCGCCTCGAAGTAACTTTTGTAGAGCTT
GATGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGG
TCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGAT
CCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGG
CAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGG
ATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCC
TGCCACTCATCGCAGTACTGTGTATTCATTAGCATTCTGCCGACATGTAG
CCATCACAAACGCATGATGACTGATCGCAGCGCATCAGCACTGTCGCTGC
GTATTATATTTGCCATGTGAACGGGGGCGAGAGTTGTCCATATGCCACGT
TTATCCAACTGGTGAACTCACCAGAATGCCTGAACGAAACCTATTC
UFO08640.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:34:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| I-3-RB | 813 | CG11233-RB | 86..730 | 9..653 | 3180 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:34:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20881897..20882541 | 653..9 | 3180 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:34:20 has no hits.
UFO08640.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:14:23 Download gff for
UFO08640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42707-RB | 80..737 | 3..661 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:17:52 Download gff for
UFO08640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| I-3-RB | 80..737 | 3..661 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:43:02 Download gff for
UFO08640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| I-3-RB | 80..737 | 3..661 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:43:02 Download gff for
UFO08640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20881890..20882547 | 3..661 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:17:52 Download gff for
UFO08640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20752917..20753574 | 3..661 | 98 | | Minus |
