UFO08641.5prime Sequence
1108 bp (1021 high quality bases) assembled on 2011-08-05
> UFO08641.5prime
CAGTCGACATGAAGGTGATCAGCATTCGCTGGAAGACCTGCCTGCCAGGC
CTTATAATAGTTTCTTACCTGGTGTGTGCTCTGTTGTATTTCGGAATGGA
TATAACAAAGATTGAGCCAGTGGAACCAAGAGTAGTGAAAAACAAGACCA
AAGTGCCACGAATGTATGCCAAAACCATCAATCATGATGGCAACTGGGAG
ACTATTGTAACTAATCCGGAATTAAAGCCCAGATATCGGGTTGGCGGCGG
TAGGACTGGTGTCCAGTTCGTGATTGGAGTACCCACTGTACTGCGACCGA
AAAAGAACTATGTGCTCCAAACCGTGGACTGTCTGATCCGTCGAATGACT
CCGGAGCAGCGCGACAATTGTCTAATTGTTATATTCGTGGGTGAAACTAA
GCTGCAGTTCGCCAAGTTCATAGTAAGGGAACTGCGTGTGAATCATTCGA
CGCATATGCAAGCTGGCCTAATCGATGTCATTGCGCCACCCTTGAATTAC
TATCCCAACTTCTCGAGACTCCACATCACGCTGAACGATGATCCGCAGCG
AGTTCAGTGGAGGACCAAACAGAACCTGGACTACATATACCTGATGTCCT
ATGCTAAGAGCAGGGGTTTGTACTACCTGCAACTGGAGGACGATGTGATG
GCGAACGTGGGTTTCATGGACTACATCCAGAAGTTTGCAGTACTGCATGG
CAGCTTTCGGATTGCCCAGCAGATCGATTGGATTGTGATGAGCTTCAGTG
AGCTGGGCTTCATAGGGAAGCTCTTTCGCACCTCCGTGCTGAGCTCCTTC
GTGGCGTACCTCAAGTTGTTCTACAATGACCAGCCCATTGACTGGCTGCT
CCAGAGCTTCGTGACCCTGCAGAGCTGTCGCTGGGATAGTGTTTCCGATC
CCGAATGTCAGCGGGACTTCGAGTCAGACTGCTGCGCTCTCGCAATCCCA
GTTTCAGCATATTGGGTGCCCAATCGTCAATGGCGGATAGCAGCATTATC
AAAAGATGCTTCCTTTACCATACTTGCAAGCAGCGCTGAGACATCTGCGA
CCAGCGCTCACCTGATCGCCACCAATCGGACTCGCGTGTTGAGCCATATT
TCGAAACT
UFO08641.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:34:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17173-RA | 1581 | CG17173-RA | 8..1101 | 8..1092 | 4915 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:34:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14768277..14769276 | 1005..8 | 4700 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:34:24 has no hits.
UFO08641.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:14:24 Download gff for
UFO08641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17173-RA | 2..1101 | 4..1092 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:18:22 Download gff for
UFO08641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17173-RA | 2..1101 | 4..1092 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:43:04 Download gff for
UFO08641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17173-RA | 2..1101 | 4..1092 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:43:04 Download gff for
UFO08641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14768183..14769284 | 1..1092 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:18:22 Download gff for
UFO08641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14761283..14762384 | 1..1092 | 97 | | Minus |
