UFO08644.5prime Sequence
1102 bp (1014 high quality bases) assembled on 2011-08-05
> UFO08644.5prime
CAGTCGACATGTCGCAACTGATGGAGATGACCCGCCACGTGACCTCTTGG
CTTGGCTGGACACCGACGCCCACATGCGACGTCGCGGAGGAGGAGGAGCC
GCTGCAGGAATCGTCCGGCATTGTGACCGTACTGGTTCTCTACCTGGGCA
TGGCCGGCATCTTTGCGGCCCTGAGTCTCTGCACCACGACCAGCGACGAC
CAGGTGCGGGCCCGGGCCAAGCGGGAACTGATGGCCATGGAGCGCCGCCA
GTTGCAGCGTCTGGAGCGGCAGGGCAGGGCAACGGGGTTAACTCTGCTGC
CAAACTGGACGACCGCCATGCCATCGCTTATTCGCGAAGTGGCTGCTCCT
AGGCCTTCAGTCATTCAACTGGAAGAGCAGCGCTTGCGGATGCGTCTGCT
CCAGCTAACGGATCAGAAGGAGCAGGAGGAGCACGATTCCCAGGATTGGC
ACGATGCTGTGGATGCGCCAGAGGAGGAGCAGGCCACCAGTTGCCTCGCC
CCCAAGAGCCAAAATTCCACTTTCTTTGACCTTCCCTTAGACTCCGAAGC
AAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATA
ATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGG
TCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACC
GAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTA
TCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCA
CTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGC
CATCACAAACGGCATGATGACCCTGAATCGCCAGCGGCATCAGCACCTTG
TCGCCTTGCGTATATATTTGCCCATGGTGAAACCGGGGGCGAGAGTTGTC
CATATTGCCCCGTTTAAATCAAACCTGTGAAACTCCACCCAGGATTGCCT
GAAACGAAAACATATCCTCATAACCCTTTAGGAAATAGCCAGTTCACCGT
ACCGGCCCCACCTGCGAATTATGTGTAGAACTGCCGAATCCGTCTGATTC
AC
UFO08644.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:34:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2533-RA | 772 | CG2533-RA | 136..675 | 9..548 | 2700 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:34:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11603340..11603879 | 548..9 | 2700 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:34:37 has no hits.
UFO08644.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:14:26 Download gff for
UFO08644.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2533-RA | 136..682 | 9..555 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:19:49 Download gff for
UFO08644.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2533-RA | 136..682 | 9..555 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:43:09 Download gff for
UFO08644.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2533-RA | 136..682 | 9..555 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:43:09 Download gff for
UFO08644.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11603340..11603879 | 9..548 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:19:49 Download gff for
UFO08644.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11497373..11497912 | 9..548 | 100 | | Minus |
