UFO08646.5prime Sequence
901 bp (854 high quality bases) assembled on 2011-08-05
> UFO08646.5prime
CAGTCGACATGGGAGAAGACAGTTCGAGGCGCCTCCCGCGCTGGTGGTTT
GGAGGGGTTTGCGCTGCAATCGCAGTCACCGGCACCCATCCGATTGATCT
CATCAAGGTACAGCTGCAGACCCAATCCCAAGCGGACCGGAAGACCGTGG
GGGAGATCCTTAAAGGCATACACGAGCGGAGCGGAATCTTGGGCTTTTAC
AATGGCATTTCGGCCTCCTGGTTTCGCCAGCTGACCTATACCACCACTCG
CTTCGCCTTGTACGAGGCCGGTAAGGACTACGTCGACACGCAAAAAGTTA
GTTCCAAGATGGCCCTGGCCACCTTTGCGGGAATCGTCGGTGGGATTGTG
GGTGTACCCGGGGACGTGGTCACAGTGCGACTCCAGAACGACGTCAAGTT
GCCGGAGGAGAAGCGACGTAACTACAAGCACGTTTTCGACGGCCTTTTCC
GCATCTACAAAGAGGAGGGCGTGTCCAGTCTCTTCCGCGGCACAGTGCCG
GCCGTTTCCAGGGCAGTCCGGCTGACCATCGGAACGAATGCAGCCTACGA
CCAAGTAAAGCAGATGCTCAAGATCGCAACGGGGGCAGGAGAGGGAGTAC
CACTGCACTTTGCCACATCCACGATAGCTGGATGCATTGCCGTGGTGATA
ACGCAGCCGCTCGATGTGATCAAGACGACTTTCATGAACGCCCAGCCGGG
GGAGTTCTCCGGGATCGGAGGTGCTTTTCTGAGTACCGCCAAACAGGGCC
CATTGGCCTTCTACAAGGATTCATTCCGGGCCCTGAATACGAATGTCACC
CAATACGATTATCACTTTCGTTTTGTACGAACCAGGCGCGAATGCAATTT
GAATTCTGCCACCTGACAATGGTAAGTCTTCTAGATCAATTCGTTTGGCG
G
UFO08646.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:34:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dic3-RA | 1001 | CG11196-RA | 42..901 | 9..869 | 4100 | 98.7 | Plus |
| Dic3-RB | 997 | CG11196-RB | 42..897 | 9..869 | 4030 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:34:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7994515..7994927 | 421..9 | 2065 | 100 | Minus |
| 2R | 25286936 | 2R | 7993898..7994344 | 869..422 | 1910 | 97.6 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:34:41 has no hits.
UFO08646.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:14:27 Download gff for
UFO08646.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11196-RA | 36..904 | 1..874 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:20:18 Download gff for
UFO08646.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dic3-RA | 36..904 | 1..874 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:43:12 Download gff for
UFO08646.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dic3-RA | 36..904 | 1..874 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:43:12 Download gff for
UFO08646.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7993895..7994344 | 422..874 | 97 | <- | Minus |
| 2R | 7994515..7994933 | 1..421 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:20:18 Download gff for
UFO08646.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3881400..3881849 | 422..874 | 97 | <- | Minus |
| arm_2R | 3882020..3882438 | 1..421 | 99 | | Minus |
