UFO08650.5prime Sequence
1110 bp (994 high quality bases) assembled on 2011-08-05
> UFO08650.5prime
CAGTCGACATGTATGAGTTTCCGCTGCTAAAAACCGATGGCCTTCGCGGT
GGCGTCGTCTACTATGATGGTCAGGTGGATGATGCCCGGATGTGCGTCGC
ATTGGTGATGACCGCGGTGGCCCTGGGCGCCAATGTGGGCAACCACATGG
AGGTGGTGGAGATTATGCCACAGGAGGGATGCTGCCGAGTTGTTAGCGTT
AAGGACAAGATCTCCTGCGAGCAGTTCTACATTCAGTCCAAGGCCGTGAT
CAATGCCACAGGCTCCAGCACAGATGCCATCCGGCAGATGGACAAGGAGG
GAACCGCACCCATTCTATTGCCCACTCTGGAAACCCAAGTATCCCTGCCC
CGCTACTTTGGTTCCGGACATTACGGTTTGTTGAGTCCGGCTCTGAAAAA
TGATGATCTCACTGTATATATGGTGCCTTTTGAGAACCACATGGTTCTAG
GCAGTCGCGAAGTGGACCTCGATGAAGTGTCTAGCCGTGGAAGTCCCACT
CCCGATCCAGATGACGTGGATTGTCTGCTAGAAGCAGCCAAGAAAAGGAT
GGATCCCTGCGTGGAGCTGGGGCGCTGTCACGTCCTTAGTGCCTGGACGG
CGATCAAGGCCAGTGTGAGCTGTCCAACCGACAAGGAAAATGATGATGAC
AAGCGTGGAACACCGATCAACAGCTATATGATCGAGGTTAGTCCCGACGG
TCTTATCACGCTGGCCGGCGGACGGTGGAGCAGTTACCGCGTGATGGCAG
CCGATGCCGTGGATTTGGCCATTAAATCTTGTGGACTATGCGACGATCAT
GTGACCTCCAGTTGGACACAGGACTTGAAGTTAGACGGAGCCGAATCATG
GTGTTGCATGCTGCCGCTAGAATTCGTGCAGGACTACGTGTGCCCATGGA
CGTGCGCATCATATCTCCGATTCCTATGGGTACATGGACATGCACTGTTC
TCTCAAGCTCCTGATCTTGAAGAAGCGCCTCCATCCGAGCTTCCCTATAT
AGAGGCCAGAAGATCAGTATTGCCATGCCGAAATGGAGTACGCCTGGCAC
CCTTGTGGGAAATCATCGCACGACGGGTTGGCCCAATAGGCCTCGTGGAA
TGCGCCGCCA
UFO08650.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:36:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7311-RD | 2316 | CG7311-RD | 747..1843 | 8..1110 | 5005 | 97.8 | Plus |
| CG7311-RE | 2294 | CG7311-RE | 725..1821 | 8..1110 | 5005 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:36:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13709014..13710015 | 8..1006 | 4735 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:36:01 has no hits.
UFO08650.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:14:43 Download gff for
UFO08650.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7311-RB | 717..1714 | 1..995 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:30:17 Download gff for
UFO08650.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7311-RE | 717..1714 | 1..995 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:43:43 Download gff for
UFO08650.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7311-RE | 717..1714 | 1..995 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:43:43 Download gff for
UFO08650.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13709006..13710003 | 1..995 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:30:17 Download gff for
UFO08650.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13709006..13710003 | 1..995 | 98 | == | Plus |
