UFO08652.5prime Sequence
1097 bp (997 high quality bases) assembled on 2011-08-05
> UFO08652.5prime
CAGTCGACATGGCTAAGATTCCTTTAAGCTGGAGCAGAGTTCTTCGGCTG
ATTCGGTTGCATCATCTGGCGGTGGGCAACATCGCCGTGCTCTGCCTTAT
TGTGTTGAGTATCATGGACTACGGGATATTAGATCTCTTCTGTTGGTTTG
AAACGGTTGAGGAGGAGAATATTCCGCTGACCGTTTTGATGTACATCGGT
GGATTAAAGGTGGCTATTATCCTGTTTCTCGCACTGTGGTGCTGGACTAG
AGAAGAAGCTGAAAAGAATCAGGAGGGCAATATGGACATGCCCATCTCTT
ACGTTCGTAAGCGGTACTGTCGTTTTCTTGTGATGAACCTGTTGGCGTCC
GTAGACCGGCTGATCCACCACCACTCACACATTGATGACTTCCTGCAAAG
TCGCAAGGACTGCGGCGAGGCAGTGGAACAGTTTCGCTGGAGAGCTCGAA
GGCTCTTTGAGCGCACGGATCTGCAACTTTGTGTTCCACTCCACGAAGTC
CTTTCTGTGGATGATCCGCAGGAGAAGGAACTCCTCCGCTTGGGTTACGG
CGATAAATTGGCACAGTTGCGAGAGCTGGACGTCTACAAGATGATCTACA
GCGACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGT
GGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAG
ATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGC
GGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACT
GGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCCG
CCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGAC
ATGAAGCCATCACAAACGCATGATGAACCTGAATCGCAGCGCATCAGCAC
TTGTCGCTTGCGTAAAATATTTGGCCATGTGAAAACGGGGGCGAGAGTGT
CATATGCACGTTTAATCAAACTGTGAAACTCACCAGGATGGCCTGAAACG
AAAACAATTCTCATTACTTTAGGAAAGGCAGGTTACCGTACGCCAAT
UFO08652.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:36:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13725-RA | 901 | CG13725-RA | 95..691 | 9..605 | 2985 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:36:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17324828..17325424 | 605..9 | 2985 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:36:09 has no hits.
UFO08652.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:14:44 Download gff for
UFO08652.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13725-RA | 87..696 | 1..613 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:31:14 Download gff for
UFO08652.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13725-RA | 87..696 | 1..613 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:43:47 Download gff for
UFO08652.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13725-RA | 87..696 | 1..613 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:43:47 Download gff for
UFO08652.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17324823..17325432 | 1..613 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:31:14 Download gff for
UFO08652.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17317923..17318532 | 1..613 | 98 | | Minus |
