UFO08655.5prime Sequence
1115 bp (1004 high quality bases) assembled on 2011-08-05
> UFO08655.5prime
CAGTCGACATGCATAAAATTGTTTGGTTTGGAACTTTAAATAAGTCGATT
GGCTACATCGGGAAAAAGAAGACCTGTCTTCTGAGTCCATGCGAGAAAAT
ATGCCTGAATTCAGCTAGAAAAACAGTACAGAGATGCGACAAAAACTATT
CACCACCAAAGTTAAGAAGAATCAAGAATTTCTATACCTACAGTGTTGTA
TTGGGGAGTCTCTTCAGTATAGTCATGTGGGCCATCTATAAGCTGGGCAA
GCCCGAGGAAGACCATCGGGGTCCCATAGAAGATGAGTTCAGTCAGCTTC
CCTGGTTCCGCCAGTACATAATGAGGATGTGGCACACACTTCAGTATTAT
GAAAAAATGATGGAAGAGCCCCAGATGGCAAGGCTGCTGCCAAATGTTGT
CCCACCGCCGTATATACAACCTCCCTATTCACTGGTGCTGGAAATCAAAG
ACGTACTGGTGCATCCAGATTGGACTTATCAGACGGGGTGGCGGTTTAAA
AAGCGGCCTGGTGTGGATTACTTTCTTCAGCAGTGCAGTCGAAATTTTGA
AATTGTAATATATACTTCTGAACAAGGTATGACCGCATTCCCCCTTCTGG
ATGCTTTAGATCCCTATGGCTACATAAAATATCGGCTAGTAAGAGGTGCC
ACGGACTTGGTAGAGGGTCAGCATACCAAGAACCTCGATTATCTTAACAG
GGATCTGAGCCGTGTGATAGTGGTGGACTGTGATCCGTATACCACTCCCC
TGCATCCCGATAATAGCTTGGTGCTCACAAAGTGGCTGGGTAACGATGAT
GATGTCCAGCTCTTTGATCTCACGGCTTTCCTGCAGTTGATTGCCGAACA
CCAAGTAAATGATGTAAGGGAGGTGCTGCGATACTATCGCCAATTCGAGG
ACCCCATGAACAGTTAAGACAACCAACGTCGACTGCAGAGCAGAGTCAGG
AAAGCATTCAGAATTTACAACTAGTGACGTCAGTGTACTTACTTTATTGG
GACGCCTCCGTCGAGGTCTTCATCAAGCAAGCCTTTCTAGACATCGTTTG
GCGCGCGGTCAGTTAGTGTCATATTCATATCATAATCTATCGTATCCAAC
TAGGCCATAGAAATC
UFO08655.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:36:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ttm3-RA | 1107 | CG6691-RA | 57..1079 | 9..1022 | 4785 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:36:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 22079688..22080703 | 9..1016 | 4600 | 98.2 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:36:23 has no hits.
UFO08655.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:14:47 Download gff for
UFO08655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ttm3-RA | 8..1044 | 1..1026 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:32:49 Download gff for
UFO08655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ttm3-RA | 48..1084 | 1..1026 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:43:52 Download gff for
UFO08655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ttm3-RA | 48..1084 | 1..1026 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:43:52 Download gff for
UFO08655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 22079679..22080715 | 1..1026 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:32:49 Download gff for
UFO08655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 22079679..22080715 | 1..1026 | 97 | | Plus |
