UFO08665.5prime Sequence
1086 bp (979 high quality bases) assembled on 2011-08-05
> UFO08665.5prime
CAGTCGACATGAGACGTTTTCGGCCCATGAATCGTTCTTGGAATGCTCTG
CGTTCGCGTTCACGTTCACGTTCACGTTCGCGTTCGCCTTTCCGTTCGCA
ATCCATTACTCGATCCCGGCCCACCCGTTCGGATACCATTTACACAGAGA
GGACGCGATTGCAGCGACGTTTCAGTCGGCCTCCCTCCTCCTGGGACATT
CCACCAGAGGGTTATAACCACCTGACTCCGCAACAGTACAAGGCCATGCT
GGCCAGCGGCCAGATTGCCTCGAGGATTCTTTCCGATGGCGTACACGGGG
GCGAGTCCGCCGCGATTTCGATGATCACTCGACAAGCTCGCCGCCTGTAT
GTGGGTAATATTCCATTCGGAGTTACGGATGAGGAGATGATGCAGTTCTT
CAATCATCAGATCATGGCTCTGGGATTTGTAGCAAAAAGCTCGCACTACA
TGGATGGCAATGCTGTGCTGACCTGCCAAACGAATCTGGAGAAGAACTTT
GCCTTTCTGGAATTCCGATCCATTGACGAGGCCAGCCAGGCCTTGAATTT
CGATGGGATGGTCTTCCGTGGACAAACCTTGAAGATAAGACGGCCACACG
ACTATCAGCCAGTGCCCTCGATTTCAGTCTCTGCAATGGAGAGCTACAGG
TCATTCAGGGTCCCTGCCATCAATGTAGCCCAACAACCGGCTGTTACCCT
TCCTGTGACCACTATTGTCCCCGATTCCCCCAATAAGATCTACGTAGTGG
CTTGCCCACCTGCCTGAATCATGATCAGGTCAAGGAACTGCTGCAGTCGT
TTGGAGAACTGAAAGGACTGAATCTGGTGATGGATACCAACACGAACCTG
AACAAGGGTTTCGCCTTCTTTGAGTACTGCGATCCCTCGGTTACCGATCA
CGCATAGCTGGATTGCACGGCATGCTGCTGGGGGATCGCAGCTGTGTCCA
GAGATCTATTCCAGCCGGAAGACGCATTCCCGCCACTTACACGTTCTTCA
GTACCGGGCATATCCACTACAGATCCTGATTCACTTACGACTCTCTGCTC
TGAACCTGGTCGCCGAGACTGCTGACACAGATTCGA
UFO08665.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:37:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| LS2-RA | 1410 | CG3162-RA | 42..1114 | 9..1060 | 4775 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:36:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23210532..23211498 | 970..9 | 4560 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:36:59 has no hits.
UFO08665.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:14:53 Download gff for
UFO08665.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3162-RA | 39..1083 | 2..1034 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:37:19 Download gff for
UFO08665.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| LS2-RA | 39..1083 | 2..1034 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:44:08 Download gff for
UFO08665.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| LS2-RA | 39..1083 | 2..1034 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:44:08 Download gff for
UFO08665.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23210457..23211501 | 2..1034 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:37:19 Download gff for
UFO08665.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19097980..19099024 | 2..1034 | 97 | | Minus |
