UFO08668.5prime Sequence
1118 bp (980 high quality bases) assembled on 2011-08-05
> UFO08668.5prime
CAGTCGACATGAACCGGCCGGAGCTGGACTACTACGCGGTGCTGGATCAG
CCCAGAGGCGCCACCAAGGAGCAGATTACTCTGGCCTACCGCCGCCTGGC
CATTCGTCTTTGCCCACATCGCGACAAGAAGGACGAGCAGGACTTTGTGC
CGCTGGCCCAGGAGGGTCGTCTCACTCACCTCTCACCCATGGGCGAGCCC
AGGCAGTGGGCTTACGTCAACATGGCCTTCGATGTGCTGGGCAACGATCT
GTACCGGGCCATATACGATCGCTTTGGCGAGGCGGGTTTGTTCGAGGGCG
TCATGCTGCCGAACGGATACTTTCCGCCCTATCAGTACGACGGCGACCAC
ATGAAGGTCTACGAGCGGGTCTTCGGTAGCTACTCGCCGTATGCCAACGT
GATCGATGCGATCTCCAATCCACCGAGTTTGTACGCTACGCGCCAGCATG
GCATTGGCGTGCGTTCCAAGGACGCCAGTACGGAGAGGATCATCGAGCTG
TCGCTGGAGGAAGTACGCACTGGCTGCGTCAAGCTGATGAACGTGTGGCG
CCAGGAGATCGTGGACGCCAAGGAGTCGCGGCTGGAGAAGCGCAAGCACA
CCTTAAAGCTGAACATTGCCCCGGGAACCACGGCCGGAACTCGCTTCTGC
TTCAAGGAGGAGGGCGATCGCTATCCGGCCACCATTCCGGGTGATATTAT
TTTCATTGCCGCCGACAAGCCGCATCCGGACTTTGAGAGGAGAAACCAAC
ACGACCTGCTCTACAGGCAGTCTATTGGCCTGTGCCAGGCCTTCACCGGC
TTCACGTTCTTCATTTGCACGCTGGACCGGCGCCAGTTGAAGTGGTCATT
ACGGACGTAGTGCAGCCGGGATACACCAAAGTGTTCCCCTCGAGGGACTC
CCAGTGCCGCAATTTGGATGCAGTTACGGCCATCAAGGAGCCACAGATGT
GAGCAGTCGGGATCTCATATAGATTTGATTATATCTTTCCCAGTATTGAC
TCACTATGAAGCATATCACTCGCGATCTCCGCGATTCCGCAAGCTCGAAT
AGATTGGGAGAGGAGAGGACGTACATGGTTGCAGCTTCTAGACATGTGGC
CGTGTCAGGAATGGCTAT
UFO08668.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:37:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12020-RA | 1242 | CG12020-RA | 61..1158 | 9..1080 | 4725 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:37:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1797365..1798300 | 9..940 | 4425 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:37:10 has no hits.
UFO08668.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:14:55 Download gff for
UFO08668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12020-RA | 61..1145 | 9..1069 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:38:52 Download gff for
UFO08668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12020-RA | 61..1145 | 9..1069 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:44:14 Download gff for
UFO08668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12020-RA | 61..1145 | 9..1069 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:44:14 Download gff for
UFO08668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1797365..1798349 | 9..980 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:38:52 Download gff for
UFO08668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1797365..1798349 | 9..980 | 97 | -> | Plus |
