UFO08670.5prime Sequence
1158 bp (1031 high quality bases) assembled on 2011-08-05
> UFO08670.5prime
CAGTCGACATGATTTCAAAGATCAAGATCTGGAGCCGCTCGCCACTGATT
CCGGCTAGGGATCACGGTTCAGCGATCCTTCCGCCGGCAGATCGGCCAGA
TCCCATTCCGGAGCTGTGCGAGGAAAGGCCGGTGATGGGTTGGCTGCTCG
GCTGGGAGTACGGGAGGAAGTGGCTGGAGAGGCGCGAGGAGATCCAGAGG
CACCGCAACATGGTCAGCAAGTTCGGCAGGATCCCGGCGGACTTCAGCTG
GTGGCTCAACCAGCGCAGGCCCCTCTATGTGCGCCAACAGCGATTCCGGA
GCAAGGCCGGACCTCGTGCCCGGAAACAGATAACGGCCTTCGAGATGGCC
AAGCGGAGGCGTGAGGAGCAGAACCGCAAGCTATTGGAGAGCCAGCCCAA
AAACCAGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAA
GTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGG
AGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCG
GCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTA
CTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCC
GCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGA
CATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATC
AGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGC
GAAGAAGTTGTCCATATTGGGCCACGTTTAAATCAAACTGGTGAAACTCA
CCCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGG
GAAATAGGCCAGGTTTCACCGTAACACGCCACATCTGCGAATATATGTGT
AGAAACTGCCGGAAATCGTCGTGTATTCACTCCAGAGCGATGAAAACGTT
TCAGTTTGCTCATGGAAAACGTGTTAACAGGGTGACCACTATCCCATATC
ACCAGCTCACCGTCTTTCCATGCATACGAATCGGAATGACCATTCATCAA
GGCGGCAGATGTATAGCCAGAATAACTTGGCCTATTTCCATACCGATCTC
TAAAAAGG
UFO08670.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:36:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14658-RA | 603 | CG14658-RA | 49..447 | 9..407 | 1980 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:36:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4830067..4830465 | 407..9 | 1980 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:36:35 has no hits.
UFO08670.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:14:49 Download gff for
UFO08670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14658-RA | 40..450 | 1..411 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:34:18 Download gff for
UFO08670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14658-RA | 40..450 | 1..411 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:43:57 Download gff for
UFO08670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14658-RA | 40..450 | 1..411 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:43:57 Download gff for
UFO08670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4830067..4830470 | 1..407 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:34:18 Download gff for
UFO08670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 655789..656192 | 1..407 | 98 | | Minus |
