UFO08672.5prime Sequence
1118 bp (1024 high quality bases) assembled on 2011-08-05
> UFO08672.5prime
CAGTCGACATGTGGGCTCCTCTGCTCGCTTTCGTTATCCTTGGGCTAAAC
TATGCAGCATCCTCGTTCGTGAACTGGGATAATGTATTTTACGAGCAGCA
GGCGACGTATCTGCGTCCTGGTGAGCCCCACATCCAGGAAGGACAGACGC
TGCTTAACATGCTGTACGTGAACAACCAGGTCCAGGTCTACTGCCAGCCG
CCAACAGCGTTCTCCATGTGGAATGTCTTCCAGAGCAACCGCCTGCGCCT
GCAGATAGCCGCTGGCGAAGATTACACTCAGTATAAAGGAGCCACCGTGC
GGGAAGTTCATCATGCGCATAGCCAGCTGGATGAGTGCCACGAAGGAAAG
CCCTTGGGGCATTCCGCAGCAGACGAGCCACGGATCGTTCCGATGGCCAC
GTATGAGCACTCCTGTTACGGCATCTACACATCCAAACCGTTCGTCCTCA
CGCTTGAAGTGATCAGTTTCGACCTTGAGCGGGTAAGCCAGTTCACCTTT
GGCATCGTTTTATGGTTAAGCTGTCCGCTCCTGGCGGATTCGCTGCTTTT
CTTCTACTGCTCAGCTGCGGCCCTGGGCGCCCACCTGGCGGGTTTGTTGG
CGGTCGCAGCCACCCTAATGGCATCTGATGGCGAGCGGTACCTGCGACTC
GGAACGCTCAAGGTGAACTTCAAGCTGGTGCTAAACGAGCGGCCCACCGT
GATAACCTTGGCGCTGGTCAGTGGCGCCTGGTTGCTGAAGTCCGCCTCCC
AGCGCTGCAGCTTTTTGTGGCGGTGCACTCTGTTTCGCCGCCTGCATCAC
CGCTTGCTGAAGGGCACCTCCTACTTGCTGATTCTCACTGCATCCGATCA
CAGGGGCTTTGGGATGACCTGCCTTATGCTGTTGATGCCCTGTCCGGAAC
TTTTGACTGTAATACGCTGGCTCAAACCCTATACGCTGCTACAAAGGGCT
CGGTTAAACCAATGTCCAGTGAATCGAGAATCAGACGTCCCTTATCAGAC
TCATATCTTCGGATCGTGCGATCGAAACGATAATCGTTCATCGGAGCCAT
GCTTTAGCCAGGACTTAGCAAACAACATACTGCTTTTATCCGGAACAGAG
AATCAGATAAATGGCCCT
UFO08672.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:36:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14006-RB | 2397 | CG14006-RB | 60..1105 | 9..1042 | 4920 | 98.7 | Plus |
| CG14006-RA | 1591 | CG14006-RA | 60..1105 | 9..1042 | 4920 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:36:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5727707..5728752 | 1042..9 | 4680 | 98.3 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:36:43 has no hits.
UFO08672.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:14:50 Download gff for
UFO08672.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14006-RA | 54..1108 | 1..1045 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:35:18 Download gff for
UFO08672.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14006-RA | 54..1108 | 1..1045 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:44:01 Download gff for
UFO08672.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14006-RA | 54..1108 | 1..1045 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:44:01 Download gff for
UFO08672.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5727690..5728758 | 1..1057 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:35:18 Download gff for
UFO08672.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5727690..5728758 | 1..1057 | 97 | | Minus |
