UFO08682.5prime Sequence
1122 bp (1007 high quality bases) assembled on 2011-08-05
> UFO08682.5prime
CAGTCGACATGTTGGCCGCCCGCAGATTACTACGATCACCGCGGATTACC
GGTGCCCTAAGCTGGTCCCGCTGGAGCAGCGATGCCGCGAAGGCCACAAC
AGAAACCTCCGCCCTTTTGCAGAACGCGGAGAAGCGGCAGCAACTGCTCA
ACGAGCTTTCTGAGCCGCTGGAACAGAAAGGCCGGCCCGCCATCGATCCC
AAGGAAACAAGTGTGATGCTCTTTCCCGGTCAGGGCACCCAGTACGTGGG
CATGGCCAAAGACCTGCTCCGGTTCCCGGGCGCCCGTCGCATCTTCGAGC
TGGCCAACGAGGTGCTGAAATACGATCTGCTCAAGATCTGCCTGGAGGGA
CCACGTGAGAAACTGAATCGCACGGAGCACGCTCAGCTGGCTGTGATGGT
ATCCTCGCTGGCAGCACTGGAGCAGTTGCGTGAGGAGCGACCCAAGGCCA
TTGAAACGTGTGTAGCTGCCGCAGGCTTTAGTTTGGGCGAGATTACCGCA
TTGGTGTACGCGGATGCCCTGCCTTTCGACAAGGCATTGCGATTGGTGCA
GGTGCGGGCCACCGCCATGCAGGCGGCATGTGACCAGGCAGCCGGAGCCA
TGGCGATGACTCTCTACGGACCGGATACCAATCTGGGAGAGGCCTGCGCT
CGCGCGCAGCAATGGTGTCTGGACAAAGGAGTGGAGTCGCCCTACTGTGG
CATCGCCAACTACATGTATCCGCACTGCAAGGTAGTGGCCGGCAACGTAG
AGGCCCTGGAGTTCCTGGAACAAAATGCCAAGTCCTTCAAAATCCGGCGG
ATGAAGAGATTGGCTGTCAGTGGCGCCTTTCACACTCCTCTAATGCAAAG
CGCCGTGAGCCATTTACCAAGCCCTGAAAACGGTGCGACTTCAGACCCCG
TCATTAGAGTGTACTCCAATGTGATGGCAAACCCTATCGCATGCCAGCAC
ATCCTACGCAGCTGCCCAAGCAAATCGTGAGGCCCGTCAGTGGGGAGCAG
ACCCCTCCCCGAGATGTACGAGCGCCAGCAAGCGTCGACTTCCCGCCACC
TCGATGCGTCTGCAAAGCCTGTTCAGTCTGGAAAAGTAATGCAGGCGCTC
ATCAGCTTAGTTAAGCGCAGCT
UFO08682.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:37:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| beg-RA | 1198 | CG7842-RA | 32..1071 | 9..1041 | 4860 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:37:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17035699..17036726 | 9..1030 | 4640 | 98.5 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:37:14 has no hits.
UFO08682.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:14:56 Download gff for
UFO08682.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| beg-RA | 26..1068 | 9..1044 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:39:24 Download gff for
UFO08682.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| beg-RA | 32..1074 | 9..1044 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:44:15 Download gff for
UFO08682.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| beg-RA | 32..1074 | 9..1044 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:44:15 Download gff for
UFO08682.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17035699..17036741 | 9..1044 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:39:24 Download gff for
UFO08682.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17028799..17029841 | 9..1044 | 98 | | Plus |
