UFO08683.5prime Sequence
1134 bp (1017 high quality bases) assembled on 2011-08-05
> UFO08683.5prime
CAGTCGACATGTCAAAGCGCTGCTGGAACCGCAACCAGCGCTCGGTGTCC
CTGCCCAGGAGCGAATTCGTCGAAATAAACCCCATGATGCCCGGCAGGAG
CACCGCAGCTGAAGGCGCACGCGGGAGAGCATCATCCGGACCTCGGATGA
CCGTGGAGACCCTGTTCCATACTTCTCACTCGGCGAAGAAGGAGCGTCCA
CAGCAGGGTGCAAAACCCATGGAAAACCGAGTTTTGAAGGAAAGCTCCAC
GTCTAAGAATTCGCGTGAGATGCCTTCTCTGCTACTCTCCACCAAGGGCA
GGCCAGATGGCACTTGGAATAATATGAGAGCCAAGGAAAACAAGCAGCAT
CGCAAAGAAGGGAGTCGCCACCTGGCTGCAACTTCCACGATGCCCAAGAT
GGATGAGCTTGGACCCGACTGGCGAAAACCTTGGCCGATCGGCGGTTTTT
CTCGGAATAATCGTAGTAGCCCTCAGATGTTCAGTACAGTTCCTTCGAAA
AGTTCTGTTAACATTTCAAGAGACAACAACAATTATCCCGATTTAAAAAT
AGAAGACACTGGGAAAAAGAGCCACACAGTCACAGGAAAGGCACCGAACA
CGCGTGCAGAAGATCAAAGGTCAGGAATGGTGGCCCATCTAAGCGGTCTA
AATAGCAAGACTAAGCACACGAGGCTGATGAGTACTTCCAAGCGCTGCAA
AGCAGGTTCGGAAGATTCTGTTTACCATCAGACCCTGAATGATGTCATCT
CCCAGTGGGATTGCCAGCCGTCGACCAGTAAAAGTAATCCATGCCAGATT
CCGAAGATTCCGAATCTGCCGTCCGGATGGACAGCTTCGCCGAGCAAAGA
CGCGGACTTCCCTTTCATGGCGGATCTGGAAAATAGGATGGGGGTCGAAA
GTCTGATGCCCGAGCTGCTGACTCCATCGCGCACTCCCAGCGCTGACAAA
GAATTCTCGCTTGGGACTTGTATGCTGATGGGCACGACGACAATTCCGCT
AGCATCTGCACGATGAGAGAATCAAAATGATCAATGGTGGGGCTCCACTG
CATACTGGAAGAAAGCACGGCAGTACTGACTTGACCAGTCTGCAAGGCCT
GGGAATCAGGGCCACTGGGTCCTATCTCGGGAAA
UFO08683.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:37:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13577-RB | 1744 | CG13577-RB | 88..1169 | 9..1073 | 4955 | 98.1 | Plus |
| CG13577-RC | 906 | CG13577-RC | 1..608 | 483..1073 | 2585 | 96.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:37:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24267981..24269031 | 1049..11 | 4685 | 98.4 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:37:17 has no hits.
UFO08683.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:14:56 Download gff for
UFO08683.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13577-RB | 68..1153 | 1..1073 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:39:52 Download gff for
UFO08683.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13577-RB | 84..1169 | 1..1073 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:44:16 Download gff for
UFO08683.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13577-RB | 84..1169 | 1..1073 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:44:16 Download gff for
UFO08683.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24267952..24269036 | 1..1073 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:39:52 Download gff for
UFO08683.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20155475..20156559 | 1..1073 | 97 | | Minus |
