UFO08688.5prime Sequence
1115 bp (999 high quality bases) assembled on 2011-08-05
> UFO08688.5prime
CAGTCGACATGCGATACCTGCCCTTTATCGCATTTTTCCTGTTTGCTCTT
CTGGCCCTGTCTGTGGGCGAGGAATTTTGCAATTGTAATCTTATCTATAG
ACCATTGTGCGCATCGAACTCCAAGACCTATAACAACTACTGTGAATTCA
AGTGTGAAGTTAAAAGGGGAAGCCCCATAACAGTGGTAAAATGGAAACAG
TGCAATGAAAGTGCGGGGAAAATAAAGATAGATTGCCAATTGCCTATAAA
CTTACAGTTGTGTAAAAGTATAAAATCTAATCGAAAAGATCCAATCGCTA
TAGCTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGT
GGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAG
ATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGC
GGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACT
GGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGC
CCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACA
TGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAG
CACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGA
AGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACC
CAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAA
ATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTA
GAAACTGCCGGAAATCGTCGTGGTATCACTCCAGAGCGATGAAAACGTTT
CAGTTTGCTCATGGAAAACGGTGTAACAGGTGAACACTATCCCATATCAC
CAGCTCACGTCTTTCATTGCCATACGAATCCGATGAGCATTCATCAGCGG
CAAGATGTGAATAAAGGCGATAAACCTGTGCTAATTTTCTTACGTCTTAA
AGCCCGTAATTCAGCTGACGGCCTGTAAGTTACTTGACACTGACTGAATG
CCTAAATTTCTTACG
UFO08688.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:38:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sfp33A3-RA | 418 | CG42474-RA | 23..320 | 8..305 | 1490 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:38:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11839934..11840231 | 8..305 | 1490 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 23:38:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 232..290 | 874..931 | 130 | 71.2 | Plus |
| accord | 7404 | accord ACCORD 7404bp | 1376..1412 | 105..69 | 113 | 78.4 | Minus |
UFO08688.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed on 2011-09-21 12:15:05 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 14:46:12 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 00:44:38 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 00:44:38 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 14:46:12 has no hits.
