UFO08689.5prime Sequence
1103 bp (1003 high quality bases) assembled on 2011-08-05
> UFO08689.5prime
CAGTCGACATGGATAAGCACGTGGCATTCATGGTCATCACCGTTTTCTGG
CTACTATTCGCCATCATTGGGTTCCTGGTGTCCTACCGATACGAGGAGCG
TGGTCTAATCCGGTGCTGTGTGATCCTAACGGCTGTATGCTGCTACTTGG
CCTGGATGGTCACCTTCGTGATGCAGTTGAATCCACTGACCGGACCGCGA
GCCAAACAGAAGATTATCCTCGGCATGATAACCTACTGGCCCAGGTCCAT
TATCCACGATGAAAAGGACCCAGCAAGCTTTCTAGACCATTCGTTTGGCG
CGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAAT
CACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACC
AATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGA
GTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGAT
ATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCAT
TAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGA
ATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCAT
GGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAA
AACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCA
ATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATC
TTGCGAATATATGTGTAGAAACTGCCGGAATCGTCGTGTATTCACTCCAG
AGCGATGAAAACGTTTCAGTTTGCTCATGGAAAACGGTGTAACAAGGGTG
ACACTATCCCATATCACCAGCTCACCGTCTTTCATTGCCATACGAATTCC
GGATGAGCATTCATCAGCGGGCCAGATGTGATAACGCCGAAAAAACTTGT
GCTTATTTTTTCTTACGTCTTAAAAGCGTTATATCCAGCTGAACGCTTGT
ATAGTACTTGAGCCACCTGACTGAAATGCCTCAATGTTCTTACGATGCCT
ATG
UFO08689.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:38:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| VhaM9.7-d-RA | 494 | CG14909-RA | 15..278 | 9..272 | 1320 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:38:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16975218..16975481 | 9..272 | 1320 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:38:17 has no hits.
UFO08689.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:15:06 Download gff for
UFO08689.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| VhaM9.7-d-RA | 9..278 | 1..272 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:46:41 Download gff for
UFO08689.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| VhaM9.7-d-RA | 9..278 | 1..272 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:44:40 Download gff for
UFO08689.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| VhaM9.7-d-RA | 9..278 | 1..272 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 00:44:40 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 14:46:41 has no hits.
