Clone UFO08690 Report

Search the DGRC for UFO08690

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:86
Well:90
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptZasp66-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO08690.5prime Sequence

1116 bp (1009 high quality bases) assembled on 2011-08-05

> UFO08690.5prime
CAGTCGACATGGAGTACGTTCAGTTCAAAAACGGATCCCCAGTCTACTAC
AAGGAGCAGCCAGACCTCAATGAGTGCATTCAATACCAACCCTACCGTAC
AACTCCGCTGGTCCTGCCCGGCGCCAAAGTGAAGAAGGATGCGCCCACGA
CAGAGTCCTACTTGAGGCACTACCCCAACCCGGCTGTGCGCGCCCACCCA
GGACACGACTACCATGACAGTATCATGAAGCAGCGCGTGGCCGACACCAT
GCTGCACAAGGTGGTCGGTTCGGAAGCCGACACTGGCCGCGTCTTCCACA
AGCAATTCAACTCGCCCATTGGCCTGTACTCCAACAACAACATCGAGGAC
ACCATCAGATCCACAGTTCCCTTCGCCACAAGCGAAAGCAATCGCTTGAA
GGACAGTCCTTTGCATCGTCCTTTGCCAACAAAACTTAACGGCTATAAGA
AAACTGTCCAGTACGATCCCAGGAACAGCGAAACCTACAGAGCCATTCAA
GAAGAGGGCGGCTACAGCAACTATGGCCAATCCTCGCCACAGGAAGTGAC
CATTCCTGTGCAGACTAAGGTCTATCAGCCCAATAGATTGGTTCCAGGAA
AGAAACCAGTATCAGCGCCAGTATCCCGGCCGCCGTACAATGTGGTAAAC
ACCCACGATGAGAACATACGCCAGAGCGGCTCCTTCAATCGTCTCATGTA
CAGCGTGATTGGTGCCACCGAGTACGCAAGCTTTCTAGACCATTCGTTTG
GCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCAT
AATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTC
ACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGAT
GGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAGCGAGCTCG
ATATCAAATTACGCCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATT
CATTAAGCATTCTGCGACATGCAAGCATCCACAAACGGCATGATGAAACC
TGATCGCAGCGGCATCAGCCACCTGTTCGCCTTGCGTATAATATTGCAAT
TGCGAACGGGGCCAGA

UFO08690.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:38:23
Subject Length Description Subject Range Query Range Score Percent Strand
Zasp66-RA 1212 CG6416-RA 173..889 9..725 3585 100 Plus
Zasp66-RJ 1352 CG6416-RJ 313..1029 9..725 3585 100 Plus
Zasp66-RF 1714 CG6416-RF 756..1391 90..725 3180 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:38:20
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8634579..8634785 86..292 1020 99.5 Plus
3L 28110227 3L 8637438..8637598 442..602 805 100 Plus
3L 28110227 3L 8638267..8638350 642..725 420 100 Plus
3L 28110227 3L 8630555..8630635 9..89 405 100 Plus
3L 28110227 3L 8635002..8635081 291..370 400 100 Plus
3L 28110227 3L 8635681..8635763 371..453 370 96.4 Plus
3L 28110227 3L 8638155..8638198 601..644 220 100 Plus
Blast to na_te.dros performed on 2014-11-26 23:38:21 has no hits.

UFO08690.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:15:07 Download gff for UFO08690.5prime
Subject Subject Range Query Range Percent Splice Strand
Zasp66-RA 208..924 9..725 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:47:09 Download gff for UFO08690.5prime
Subject Subject Range Query Range Percent Splice Strand
Zasp66-RJ 313..1029 9..725 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:44:41 Download gff for UFO08690.5prime
Subject Subject Range Query Range Percent Splice Strand
Zasp66-RJ 313..1029 9..725 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:44:41 Download gff for UFO08690.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 8630555..8630635 9..89 100 -> Plus
3L 8634583..8634783 90..290 100 -> Plus
3L 8635002..8635081 291..370 100 -> Plus
3L 8635681..8635752 371..442 100 -> Plus
3L 8637439..8637598 443..602 100 -> Plus
3L 8638157..8638195 603..641 100 -> Plus
3L 8638267..8638350 642..725 100 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:47:09 Download gff for UFO08690.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8623655..8623735 9..89 100 -> Plus
arm_3L 8627683..8627883 90..290 100 -> Plus
arm_3L 8628102..8628181 291..370 100 -> Plus
arm_3L 8628781..8628852 371..442 100 -> Plus
arm_3L 8630539..8630698 443..602 100 -> Plus
arm_3L 8631257..8631295 603..641 100 -> Plus
arm_3L 8631367..8631450 642..725 100 == Plus