UFO08691.5prime Sequence
1111 bp (1040 high quality bases) assembled on 2011-08-05
> UFO08691.5prime
CAGTCGACATGATGAACCTGTCGAGAGCTGTTGTCCGTAGCTTCGCTACC
ACCGCTGGCCGCCGGTCCGCCGCCGTGCCCAAGGACCAGATCGAGAAGGG
ATACTTCGAGATCCGCAAGGTGCAGGAGCACTTTCAGAAGAAGGACGGCA
AGCCCGTCTTCCTCAAGGGATCCGTCGTGGACAACGTGCTCTACCGCGTC
ACCGTCGCTCTCGCCCTCGTCGGCATCGGTGGCATGGGCAAGCTTTTCTA
CGAGCTGAGTGTTCCCAAGAAGGAGGCAAGCTTTCTAGACCATTCGTTTG
GCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCAT
AATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTC
ACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGAT
GGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTC
GATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATT
CATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACC
TGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCC
CATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAAT
CAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTC
TCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCAC
ATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGGTATTCAC
TCCAGAGCGATGAAACGTTTCAGTTTGCTCATGGAAAACGGTGTAACAAG
GTGACACTATCCCATATCACCAGCTCACCGTCTTTCATTGCCATACGAAA
TCCGGATGAGCATTCATCAGCGGGCAGATGTGAATAAGCCGATAAACTTG
TGCTTATTTTTCTTTACGTCTTTAAAAGCGTATATCCAGCTGACCGGTCT
GTTATAGTTACATGAGCACTGACTTGATTGCCTCGAATTCTTACAGCCAT
GGAATTGCACG
UFO08691.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:38:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9603-RA | 621 | CG9603-RA | 114..380 | 9..275 | 1335 | 100 | Plus |
| CG9603-RB | 566 | CG9603-RB | 77..325 | 27..275 | 1245 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:38:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8340523..8340771 | 275..27 | 1245 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:38:26 has no hits.
UFO08691.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:15:07 Download gff for
UFO08691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9603-RA | 105..383 | 1..280 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:47:40 Download gff for
UFO08691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9603-RA | 107..385 | 1..280 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:44:43 Download gff for
UFO08691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9603-RA | 107..385 | 1..280 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 00:44:43 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 14:47:40 has no hits.
