UFO08692.5prime Sequence
1095 bp (992 high quality bases) assembled on 2011-08-05
> UFO08692.5prime
CAGTCGACATGGCAGCTTATACCGAGGATCAGTTGGCTGAATTCCAGGAG
GCCTTCAACCTGTTCGACAACCGCGGAGATGGCAAAATTCAGCTGAGCCA
GGTGGGCGAGTGCCTGAGGGCCCTGGGCCAGAACCCCACCGAGTCGGATG
TGAAGAAGTGCACCCACCAGCTGAAGCCCGACGAGCGCATCTCGTTCGAG
GTGTTCCTGCCCATCTATCAGGCGATCTCCAAGGCCCGCTCGGGCGATAC
GGCTGATGATTTCATCGAAGGACTGCGTCACTTCGACAAGGACGCCAGCG
GTTATATCTCCTCCGCCGAGCTGCGCCACCTGCTGACCACGCTGGGCGAG
AAGCTCACCGACGAGGAGGTCGAGCAGCTGCTGGCCAACATGGAGGACCA
GCAGGGCAACATCAACTACGAGGAGTTCGTGCGCATGGTCATGAGCGGTG
CAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCAT
AATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTG
GTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAAC
CGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCT
ATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCC
ACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAG
CCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTT
GTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGT
TGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGA
TTGGCTGAGACGAAAAACATATTTCTCATAAACCCTTAGGAAATAGCCAG
GTTTCACGTACACCGCCACATCTGCGAATATATGTGTAGAACTGCGAAAT
CGTCGTGCATCACTCAGAGCGATGAAACGTTTCAGTGCTCATGAAACGGT
GTACAGGTGAACCCTTCGATATCACAGCACGGCTCATGCATCGAA
UFO08692.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:38:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mlc-c-RA | 1302 | CG3201-RA | 116..561 | 4..449 | 2185 | 99.3 | Plus |
| Mlc-c-RB | 1248 | CG3201-RB | 97..507 | 39..449 | 2025 | 99.5 | Plus |
| Cam-RD | 3406 | CG8472-RD | 406..497 | 282..373 | 190 | 80.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:38:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5619877..5620287 | 449..39 | 2025 | 99.5 | Minus |
| 2R | 25286936 | 2R | 12269291..12269382 | 282..373 | 190 | 80.4 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:38:30 has no hits.
UFO08692.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:15:08 Download gff for
UFO08692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mlc-c-RA | 131..580 | 1..449 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:48:09 Download gff for
UFO08692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mlc-c-RA | 112..561 | 1..449 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:44:45 Download gff for
UFO08692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mlc-c-RA | 112..561 | 1..449 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:44:45 Download gff for
UFO08692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5619877..5620286 | 40..449 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:48:09 Download gff for
UFO08692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5513910..5514319 | 40..449 | 99 | <- | Minus |
