UFO08704.5prime Sequence
998 bp (940 high quality bases) assembled on 2011-08-05
> UFO08704.5prime
CAGTCGACATGGCCAAGTCCAAGAACCACACAAATCACAACCAGAACAAG
AAGGCCCATCGTAATGGCATCAAGCGCCCGCTGCGCAAACGCCACGAGTC
CACTCTGGGTATGGATGTGAAATTCCTGATCAACCAGCGCTACGCACGCA
AGGGAAACCTTTCCCGCGAGGAGTCCGTGAAGCGCTACAACGAGCGCATC
GCTTCCCAGAAGGGCAAGCCAAAGCCTGTTACTCTGGCAAGCTTTCTAGA
CCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATA
ATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTG
CTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAA
CAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTC
CAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTA
CTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGG
CATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTA
TAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGC
CACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGA
AAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTTACCG
TAACACGCCACATCTTGCGAATATATGTGTAGAACTGCCGGGAAATCGTC
GTGGTATTCACTCCAGAGCGATGAAAACGTTTTCAGTTTGCTCATGGAAA
ACGGTGTACAAGGGTGAACACTATCCCATATCACAGCTCACCGTCTTTCA
TTGCCATACGAAATTCCGGATGAGCATTCATCAGGCGGGCAGAATTGTTC
ATAAAGGCCGGATAAAACTTTGTGCTTATTTTTTCTTTTACGGTCTTT
UFO08704.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:41:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpL29-RD | 304 | CG10071-RD | 29..256 | 9..236 | 1125 | 99.6 | Plus |
RpL29-RB | 389 | CG10071-RB | 114..341 | 9..236 | 1125 | 99.6 | Plus |
RpL29-RA | 329 | CG10071-RA | 54..281 | 9..236 | 1125 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:41:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21294231..21294356 | 111..236 | 615 | 99.2 | Plus |
2R | 25286936 | 2R | 21294060..21294161 | 9..110 | 510 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 23:41:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
transib1 | 2167 | transib1 TRANSIB1 2167bp | 232..299 | 805..872 | 132 | 69.6 | Plus |
UFO08704.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:15:29 Download gff for
UFO08704.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL29-RB | 99..326 | 9..236 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:03:37 Download gff for
UFO08704.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL29-RA | 54..281 | 9..236 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:45:46 Download gff for
UFO08704.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL29-RA | 54..281 | 9..236 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:45:46 Download gff for
UFO08704.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21294060..21294161 | 9..110 | 100 | -> | Plus |
2R | 21294231..21294356 | 111..236 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:03:37 Download gff for
UFO08704.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17181565..17181666 | 9..110 | 100 | -> | Plus |
arm_2R | 17181736..17181861 | 111..236 | 99 | == | Plus |