UFO08707.5prime Sequence
1106 bp (971 high quality bases) assembled on 2011-08-05
> UFO08707.5prime
CAGTCGACATGGCATCTGTTGTAGCTGATCTTCCGTCTTATGGACCTATC
GCTTTTGATCAGGTGGATAACAACACGAACGCGACCCAGCTATTCAAAAA
TAATATAAACAAAACCAGAATGAACGATTTAAACCGCGAGGAGACGCGAT
TAAAGACCTTCACCGACTGGCCGCTGGACTGGCTGGATAAACGCCAATTG
GCCCAAACCGGCATGTACTTCACACACGCCGGCGACAAAGTTAAATGCTT
TTTCTGCGGCGTGGAAATCGGTTGCTGGGAGCAGGAGGATCAGCCCGTGC
CGGAACATCAGCGATGGTCGCCCAACTGTCCACTGTTGCGCCGGCGCACT
ACCAACAATGTGCCGATCAATGCCGAAGCATTAGATCGCATCCTGCCGCC
AATAAGCTACGATATCTGCGGCGCCAACGACTCGACGCTGGAGATGAGGG
AGCATGCCTACGCAGAAGGCGTCATACCCATGTCGCAGCTAATTCAGTCG
ATTGGCATGAATGCAGTAAATGCGGCAGGCAGTGTAACTGGAACCGCAGC
CCCGCAGCCGAGGGTAACGGTCGCCACCCATGCGTCGACGGCGACACAGG
CCACTGGCGATGTCCAGCCGGAGACGTGTCGTCCTTCAGCCGCCAGTGGC
AATTATTTTCCCCAGTATCCCGAATACGCCATCGAGACGGCACGCCTGCG
CACCTTCGAGGCTTGGCCGAGGAACCTGAAACAGAAGCCCCACCAGCTGG
CCGAGGCGGGTTTCTTCTATACAGGCGTTGGGGATCGCGTCCGCTGCTTC
AGTTGCGGCGGTGGTCTCATGGATTGGAACGACAACGACGAGCCCTGGGA
ACAGCACGCTCTCTGGCTAAGTCAGTGCCGATTCGTCAAGCTGATGAAGG
TCAGCTCTATATCGATACGGTGGCCGCCAAACCAGTGCTGGCCGAGGAGA
TGAGGAAGCTCTCGATTGAGGGTCGCGATGCCAGCACACAGGCTTCAGAA
GGAAGAGCAACAGACTCACTCCTCATCGGAGAGGTCGTTTCGGGGGATTG
TGCTTCCGTTCTGTAGCTCCCATGTCAGTCCACCGCATCTTCAACATGAT
GCTCTA
UFO08707.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:41:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Diap1-RF | 2233 | CG12284-RF | 655..1751 | 9..1100 | 4985 | 97.7 | Plus |
| Diap1-RE | 2304 | CG12284-RE | 726..1822 | 9..1100 | 4985 | 97.7 | Plus |
| Diap1-RD | 1754 | CG12284-RD | 176..1272 | 9..1100 | 4985 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:41:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16038892..16039988 | 1100..9 | 4670 | 97.1 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:41:14 has no hits.
UFO08707.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:15:31 Download gff for
UFO08707.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| th-RC | 231..1336 | 1..1105 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:05:06 Download gff for
UFO08707.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| th-RD | 170..1275 | 1..1105 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:45:52 Download gff for
UFO08707.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Diap1-RD | 170..1275 | 1..1105 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:45:52 Download gff for
UFO08707.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16038887..16039994 | 1..1105 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:05:06 Download gff for
UFO08707.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16031987..16033094 | 1..1105 | 97 | | Minus |
