UFO08708.5prime Sequence
1155 bp (1038 high quality bases) assembled on 2011-08-05
> UFO08708.5prime
CAGTCGACATGTCAGAAGAAGAAGCCCCAGGATCTCCGGGTGAGGCTGTT
GAAGAAGAAGATACCACTACATCCGATGCTGATACAACCACAGCTGGTGC
CCGCATGATGATGATCCACCCATGGCTGACGGCCGCCGCAGTGGCCATGT
ATGCCACCAAGGTCATGTGGGTCAAGTTCCGTGAGATCGGCCTGGCTAAA
CAGGAAAAACGGCTCAAAAATCAACTGGCGAAGCAGTCTAAGCCCTTGCA
GACTATTGATGAAGATGTTTCCGAATCTGATGCAGAATATGATGCAGAAT
CTGATGCAGAATCTGATGCAGAATCAGATGCAGAGGACGAAGACGTCGTC
GGGCCCCAAGTCGAAGATGCAGCAGAGGGACCGGGATTCGAGCCAAACCG
TGTGGATATATGCCATCGCCCGATCGAAGTCTCTACTGACTGCGCAAGCT
TTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCAT
AATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATG
ACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCG
TTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAAC
AGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCAT
CGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCA
CAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCC
TTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCA
TATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCT
GAGACGAAAAACATATTTCTCAATAAACCCTTTAGGGAAATAGGCCAGGT
TTTCACCGTACACGCCACATCTTGCGAATATATGTTGTAGAACTGCCGGA
AATCGTCGTGGTATTCCCTCAGAGCGATGAAACGTTTCAGTTGCTCATGA
AACCGGGTGTAACAAGGGTGAACACTATTCCATATCACAGCTCACGTCTT
TCATTGGCCATCGAATCGGAGTGAACATTCTCAGGCGGCAAAGTGGTAAA
TAAGG
UFO08708.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:41:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12699-RB | 766 | CG12699-RB | 74..508 | 9..443 | 2175 | 100 | Plus |
| CG18469-RA | 509 | CG18469-RA | 108..212 | 99..203 | 225 | 81 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:41:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17246788..17247222 | 443..9 | 2175 | 100 | Minus |
| 2R | 25286936 | 2R | 17246066..17246170 | 203..99 | 225 | 81 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:41:17 has no hits.
UFO08708.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:15:32 Download gff for
UFO08708.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12699-RB | 65..515 | 1..451 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:05:36 Download gff for
UFO08708.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12699-RB | 65..515 | 1..451 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:45:54 Download gff for
UFO08708.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12699-RB | 65..515 | 1..451 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:45:54 Download gff for
UFO08708.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17246788..17247231 | 1..443 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:05:36 Download gff for
UFO08708.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13134293..13134736 | 1..443 | 99 | | Minus |
