UFO08711.5prime Sequence
1085 bp (953 high quality bases) assembled on 2011-08-05
> UFO08711.5prime
CAGTCGACATGGCCTCGAATCAGCAAATCAATACGCAGCTAAGCAAAAAG
CTATCCTGGCTGTTGCGGCACGGTGCGAAAACGGAGGGAATCACGATCCG
TGCTGATGGATTTGTTAGCGTTCCCGATTTGCAGAAGCACCCACGCTACT
TGTGCTTCACCTTAGAAAAACTGAAGGAGATTGCCGCCGCGGATGCCAAG
CAACGATATACTCTTCGCTGGAATCCAGAACTCGGAGTCCATGAGATTCG
CGCCAATCAGGGACACTCATTGGCGGTGCTGGAAGGCGAAGCTGGCGGTC
TCGAGAATATTACCCATGTGAGCCAGGTACCCCTGGCAGTTCATGGCACC
TATTACAGACATTGGGGGGCAATTAGAAGCCAAGGGCTAAGTAGGATGAA
CCGCAACCATGTGCACTTTGCATGCAGCGATGAGACCAATTCCACTCTGA
GTGGATTCCGCAGCGATTGCCAGATTTTGATATATCTAAACGTGGAAAAG
GTGCTGGCGGACGGCATACCCATCTATCGATCCAGCAATAATGTACTGCT
CTGTCCGGGAATTGAAGGCTTCATACATAGTTCCTACTTTCAGCGTGTAG
TGGACAAGAAAACGGGGCAACCCTTACAAATTGATCATTGTTATGCAAGC
TTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCA
TAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCAT
GACTAGTGCTTGTATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGC
GTTCTGAACAAATCCAGATGGAGTTCTTGAGGTCATTACTGGATCTATCA
ACAGGAGTCCAAGCGAGCTCGATTATCAAATTACGCCCCGCCCTGCACTC
CATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCGACATGAAGCCATC
ACAACGGCATGATGACCTTGATCGGCAGCGCATCAGCACTTGTCCGCTTG
GCGTATAATAATTGCCATGATGAAAACGGGGCGAAGAGCTTGTCATATGG
CCAGTTAATCAACCTGTTAAACTCACCCAGGATGG
UFO08711.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:40:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33057-RB | 3058 | CG33057-RB | 81..716 | 9..644 | 3180 | 100 | Plus |
| CG33057-RA | 3110 | CG33057-RA | 81..716 | 9..644 | 3180 | 100 | Plus |
| mkg-p-RD | 3058 | CG7163-RD | 81..716 | 9..644 | 3180 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:40:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8404562..8405197 | 644..9 | 3180 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:40:38 has no hits.
UFO08711.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:15:26 Download gff for
UFO08711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33057-RA | 70..715 | 1..648 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:01:13 Download gff for
UFO08711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33057-RA | 75..720 | 1..648 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:45:37 Download gff for
UFO08711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mkg-p-RD | 75..720 | 1..648 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:45:37 Download gff for
UFO08711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8404558..8405203 | 1..648 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:01:13 Download gff for
UFO08711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8397658..8398303 | 1..648 | 99 | | Minus |
