UFO08718.5prime Sequence
1144 bp (1011 high quality bases) assembled on 2011-08-05
> UFO08718.5prime
CAGTCGACATGCCACGCAATACCAAAGACACCACCGGAGTGCTTTACGAA
TCCGATGTCGAGACAGTAGACGGTGGATTGTCGACGGAGCTAAGCAATCG
GAAGACCACCGATGGAAGTAAACTGGAGTTGGTATGGGTCAATATAGTGC
TGTTCGTGATCCTTCACATATCTTCGCTATATGGAGTCTGGCTGCTCTTC
ACTTCGGCCACGTGGACAACGGTCGTGCTCTTTTGGCCAACGGTTGTGGT
GACCATTTTGGGAGTTTCCGGCGGTGCCCATCGTTTGTGGGCTCATCGCA
CATTCAAGGCGAATACACCGCTCAAGCTGATCTTTTTGTTCCTGAACACT
TTGGCCTTTCAGGATGCGGTCTACTATTGGGCCCGGGATCATCGCGTCCA
CCACAAGTATACGGAAACTGATGCGGATCCGTACAATTCGCAACGTGGTT
GGTTCTTTGCCCACATCGGTTGGTTGTGCTGCCGCAAGCATCCGGAGGTT
GTGGAGAAGGGCAAGCAAATAGATCTATCCGATCTGGAGGCAGATCCACT
GATCATGTTCCAGAAGAAATACTACCTGCTGCTAATGCCAATCATTTGCT
TTGTCCTGCCCACCGTTTTGCCCATGTATCTGTGGGGCGAATCACTCAAT
GTGTCCTGGCACGTGATGGCCCTGCTTCGATGGTGCCTCAGTCTCAATCT
CATCTGGACGGTCAATAGCTCGGCCCACATGCACGGCATGCGGCCTTACG
ACAAGAACATATGTCCAGTCGATCAGGGCTTCCTCATATTTTTCCGTGTG
GGTGAGGGATACCACAACTACCACCATGTCTTTCCCTGGGACTACAAGAG
CGCCGAGCTGGGCAAGTATTCGCAGGATGTGACCACCAAGTTTATCGAAT
TCATGGCCTATTTGGGTTGGGCCTACGATCTAAAGAGTGTCTCACTGATT
TGGTCAAGCAGCGAGTCAGCGCTCTGGCGATGGATCACATCCTGTTTGGG
GTTGGGGCGATACGATCATTAAGGAGGCGTGGGCGTGACCACATTACCCA
CAACGAAATGAAAGCAGCTTCTAACAATTCGTTTGCGCGCCGGGCCCAGT
ATTGCCTAAATCAAATCCTAATCTATCTATCACTAGCCTAGGAT
UFO08718.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:41:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fad2-RA | 1312 | CG7923-RA | 4..1067 | 8..1063 | 5090 | 99.1 | Plus |
| Desat1-RD | 1934 | CG5887-RD | 454..814 | 268..628 | 370 | 74.5 | Plus |
| Desat1-RB | 1978 | CG5887-RB | 498..858 | 268..628 | 370 | 74.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:41:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11023538..11024544 | 8..1012 | 4935 | 99.8 | Plus |
| 3R | 32079331 | 3R | 12446014..12446314 | 268..568 | 290 | 73.1 | Plus |
| 3R | 32079331 | 3R | 12436761..12436932 | 259..430 | 275 | 77.3 | Plus |
| 3R | 32079331 | 3R | 13283528..13283588 | 804..864 | 185 | 86.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:41:54 has no hits.
UFO08718.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:15:38 Download gff for
UFO08718.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fad2-RA | 2..1069 | 7..1067 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:09:40 Download gff for
UFO08718.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fad2-RA | 2..1069 | 7..1067 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:46:05 Download gff for
UFO08718.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fad2-RA | 2..1069 | 7..1067 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:46:05 Download gff for
UFO08718.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11023532..11024603 | 1..1067 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:09:40 Download gff for
UFO08718.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11016632..11017703 | 1..1067 | 98 | | Plus |
