UFO08725.5prime Sequence
1120 bp (1007 high quality bases) assembled on 2011-08-05
> UFO08725.5prime
CAGTCGACATGGAGCTGGCAGGGATTAGGTACGGGTTCAGCTTGTGGCTC
CTCTTGCTCCATTTCAGCTGTATCCTGGCCATCATCGATCACACAAAATG
CAAAGAATGCGAACAGTACAAATACAAATTGCCAGAGAGATGCAAATATT
TGGTGGAGGATATTCATGTGTTTGAGCGAAAATGTGGCGGCACATATCCA
CTAATGGCATTTACCAAATATCGGGATACATTCGTTAAGACCGGCGAACC
ATATTCCCTGTACATGCCAAGCTCCTTGGATCATGTGCTTCTGCTGATGA
AGGACTCCGCATTGCAGAGCTGTGCGCGCATTCAAGTGGGCGATACGAAC
ACGTTCTTTTGCCTGGACGATAGCACCAATGAGACGATCAAACTGGATGT
GGCCCACATGTATTGCTTCCCATTTCATATCCAGCTGCCGGATGATCTGA
TGCAGGAGTGCCTCATAGAGAATGAGATGACCAATGGCTTTCTGAACGAT
ATCCTTCGCACACGACGCGGCATCATCCACTATACCTTTGGCTCTAGTCG
GGGCCATCGTCTCAATTGTGGATATTTGTTGCCGAATCTCCTGCTCCTCG
TGCCTCATCTCCTGCCATCGATGATGAGTCGTAAATTTTTATGCGAGCTG
CCAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGG
TCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTATGAGAT
CCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGG
CAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGG
ATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCT
GCACTCATCGCAGTACTGTTGTATTCATTAAGCATTCTGCCGACATGAAG
CATCACAAACGCATGATGACTGATCGCAGCGCATCAGCACCTTGTCGCTT
GCGTATTATTTTTGCCATGTGAAACGGGGCGAGAGTGTCATATGCCACGT
TAATCAAACTGGTGAACCTCACCAGGAATGCTGAAACGAATCAATTCCAT
AGGCCTTAGATATGGCAGCT
UFO08725.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:42:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12680-RC | 948 | CG12680-RC | 99..743 | 9..653 | 3210 | 99.8 | Plus |
| CG12680-RB | 797 | CG12680-RB | 99..743 | 9..653 | 3210 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:42:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4997539..4998183 | 9..653 | 3210 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:42:27 has no hits.
UFO08725.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:15:42 Download gff for
UFO08725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12680-RB | 1..648 | 9..657 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:13:05 Download gff for
UFO08725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12680-RB | 94..751 | 1..661 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:46:20 Download gff for
UFO08725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12680-RB | 94..751 | 1..661 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:46:20 Download gff for
UFO08725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4997534..4998191 | 1..661 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:13:05 Download gff for
UFO08725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4891567..4892224 | 1..661 | 98 | == | Plus |
