UFO08729.5prime Sequence
1109 bp (1020 high quality bases) assembled on 2011-08-05
> UFO08729.5prime
CAGTCGACATGATGCGGAGATCACAGATCGGTTTGCTCAGCAGGCTGCTG
CTGTTGCTGCTGGTGGTGGAACTGACGCCCCCTGCTATTCCGGTGCCCAT
GCGATCCTCACCCCAATCGCTGGCCCTACTGCGAGCACGGGATCAGTGCG
GCAGGGAGCTGACTGCTGCCCAGCGTCTGCAGCTGGACAGGATGCAATTC
GAGGATGCTGCCCATGTGCGTCACTATCTCCATTGCTTCTGGTCACGGCT
GCAGCTCTGGCTGGATGAGACCGGATTCCAGGCACAGCGCATCGTTCAGA
GTTTCGGCGGCGAGAGGCGTCTCAATGTGGAGCAGGCACTGCCAGCCATC
AACGGGTGCAATGCGAAAACGAGCTCCAGAGGATCGGGCGCTCAGACAGT
GGTCGACTGGTGTTTCCGTGCCTTTGTCTGCGTGCTGGCCACTCCAGTCG
GTGAGTGGTACAAGCGCCACATGTCCGATGTCATCAATGGGAATGCCGCA
AGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAA
TCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGT
CATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCG
AGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTAT
CAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCAC
TCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCC
ATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGT
CGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTG
TCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGATTG
CTGAGACGAAAACATATCTCAATAAACCCTTTAGGAATAGCAGTTTTCAC
CGTACACGCCACATCTTGCGAATATATTGTGTAGAACTGCCGGAAATCCG
TCATGCTTTCACTCCGAGGGATGAAACGGTCAGGTTGGCTCATGAACGGG
TTACAGGGT
UFO08729.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:42:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp8a-RA | 597 | CG12665-RA | 21..509 | 9..497 | 2445 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:42:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9215158..9215611 | 44..497 | 2270 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 23:42:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| roo | 9092 | roo DM_ROO 9092bp | 1097..1145 | 93..44 | 121 | 74 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6774..6818 | 89..44 | 119 | 76.1 | Minus |
UFO08729.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:15:44 Download gff for
UFO08729.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp8a-RA | 1..489 | 9..497 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:14:39 Download gff for
UFO08729.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp8a-RA | 13..509 | 1..497 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:46:27 Download gff for
UFO08729.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp8a-RA | 13..509 | 1..497 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:46:27 Download gff for
UFO08729.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9214888..9214931 | 1..44 | 91 | -> | Plus |
| X | 9215159..9215611 | 45..497 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:14:39 Download gff for
UFO08729.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9108921..9108964 | 1..44 | 91 | -> | Plus |
| arm_X | 9109192..9109644 | 45..497 | 100 | == | Plus |
