UFO08730.5prime Sequence
1093 bp (992 high quality bases) assembled on 2011-08-05
> UFO08730.5prime
CAGTCGACATGAAGCTAACACTGCGACGCTACTCCTGGGTGCTCCTGTTC
CAGTTCGCCCTTTTGGGAGTGGACCTCTTTTGCAACGCCTTTGGTCCTTC
GCTGGCCAGAAACCGATTGCAGACAGCCATAATTCTCTTTGTCACTCAGG
ATGCCCTGATTATCGCGGAGTACCTGCTGTTCACCCTCGCCCTGCACTCG
ACGTGTGTGTACCAGGTCGGCGCCTCGCACATAATCCTGCGGAATTGCAA
GCTCTTCATGGCCAGCATTACCATCTACTTCCTTCTGTCCGCCTCCCAGC
ACTTTTGGATCATCTACCAATACCGTCAGCCGCCAGAAGAGGACGGTCAT
CATTGGCCACTGGGTCTGATTGCCCTATCAGTGGCACAGCGCATCATGTC
GGTTTTCTATTACTACAGCTCCAAGTCGACGGCTCTGACCATGGCAGATC
CTCGCTTCAAGGAGGAGCATCTTGACTGGATCGCAGATCAGCTGGGCGAT
AAGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGG
TCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGAT
CCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGG
CAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGG
ATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCC
TGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATG
GAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCA
CCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAG
AAGTGTCCATATTGCCACGTTTAAATCAAAACTGGTGAACTCACCCAGGA
TGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGAAATAGCAGTT
TTCACGTAACACGCCCAATCTGCGAATATTATGGTGTAGAACTGCCGAAA
TCGGTCTTGTTATTCACTCCGAGCGATGAAACGTCAGTTGGCT
UFO08730.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:42:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13999-RA | 1041 | CG13999-RA | 241..736 | 8..503 | 2480 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:42:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5955781..5956034 | 396..143 | 1270 | 100 | Minus |
2L | 23513712 | 2L | 5956092..5956226 | 142..8 | 675 | 100 | Minus |
2L | 23513712 | 2L | 5955617..5955723 | 503..397 | 535 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:42:46 has no hits.
UFO08730.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:15:45 Download gff for
UFO08730.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13999-RA | 235..740 | 1..508 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:15:08 Download gff for
UFO08730.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13999-RA | 235..740 | 1..508 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:46:30 Download gff for
UFO08730.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13999-RA | 235..740 | 1..508 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:46:30 Download gff for
UFO08730.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5955617..5955723 | 397..503 | 100 | <- | Minus |
2L | 5955781..5956034 | 143..396 | 100 | <- | Minus |
2L | 5956092..5956232 | 1..142 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:15:08 Download gff for
UFO08730.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5955617..5955723 | 397..503 | 100 | <- | Minus |
arm_2L | 5955781..5956034 | 143..396 | 100 | <- | Minus |
arm_2L | 5956092..5956232 | 1..142 | 97 | | Minus |