UFO08734.5prime Sequence
1091 bp (986 high quality bases) assembled on 2011-08-05
> UFO08734.5prime
CAGTCGACATGGTTCTTATTATGCGTGTTTCCCCGCCGGAACATGGTCTG
TTGTATACGGCAAACAATATCAAGCTGAAACTAGGCGACAAAGTGGTGGG
CGAAGGCACAGTTTACATTGCCCAAAACACGCTATCCTGGCAGCCAACTG
AATTGGCGGAGGGTATATCCATTGAGTGGAAGCAGGTTAGCCTGCACGGT
ATCTCTTCGAATCCGAGAAAGTGCATCTACTTCATGCTGGACCACAAAGT
CGAGTGGAACGGCGTCTACGGAGATCCTCCCCAGCAGGCAGTCAATGGTC
GGAATGGCGGTGGTTCGGAAGCGGAAGTGGACGAGGGAAATGGCAGCGAT
GAGCACGATGAGGACGACAATTTCGAGGATGCCGTAGACGAGCAATTTGG
AGAGGTCACAGAGTGCTGGCTTATGCCGGAGGACATTCACACCGTAGACA
CTATGTACAGTGCCATGACGACTTGCCAGGCCCTACATCCTGATTCGGCA
AACAGTGATTCGGAAGACAGCGATCCTATGCAGGATGCCGGTGGCTTAGA
GGATGAGGCTATGGAGGAGGATGATGCATTGACGCTTGGGCGCAACGGCG
TGCAGAATCTCAGTTTGGACGACGACGAAGAGCGATTCGAGGACGCTGAT
GAGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGG
TCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGAT
CCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGG
CAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGTCATTACTGGA
TCTATCAACAGAGTCCAAGCGAGCTCGATATCAAATTACGCCCGCCCTGC
ACTCATCGCAGTACTGTGTATTCATTAGCATTCTGCCGACATGCAGCATC
ACAAACGGCATGATGACCTGAATCGCAGCGCATCAGCACTTGTCGCCTTG
CGTATATATTTGCCCATGTGAACGGGGGCGAGAAGTTGTCCATATTGTAC
GTTATTCAACTGGGACTCACCAGATGCTGAACGAAACATTC
UFO08734.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:42:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| icln-RA | 832 | CG4924-RA | 70..714 | 9..653 | 3225 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:42:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17591238..17591763 | 128..653 | 2630 | 100 | Plus |
| 2R | 25286936 | 2R | 17591033..17591151 | 9..127 | 595 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:42:12 has no hits.
UFO08734.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:15:40 Download gff for
UFO08734.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| icln-RA | 68..718 | 9..659 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:11:35 Download gff for
UFO08734.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| icln-RA | 70..720 | 9..659 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:46:13 Download gff for
UFO08734.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| icln-RA | 70..720 | 9..659 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:46:13 Download gff for
UFO08734.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17591033..17591151 | 9..127 | 100 | -> | Plus |
| 2R | 17591238..17591769 | 128..659 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:11:35 Download gff for
UFO08734.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13478538..13478656 | 9..127 | 100 | -> | Plus |
| arm_2R | 13478743..13479274 | 128..659 | 99 | == | Plus |
